Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1801 |
Symbol | |
ID | 4204392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1996427 |
End bp | 1997311 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642566351 |
Product | stage III sporulation protein AA |
Protein accession | YP_699116 |
Protein GI | 110801582 |
COG category | [S] Function unknown |
COG ID | [COG3854] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02858] stage III sporulation protein AA |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAGAGA TATTTGATGT ATTACCAGAT AAGATAAATT CTTGTTTAAA AGATAAAAAT AATTTAAATA AATTACAAGA AATTAGAGTT AAGATTGGAA AACCTCTTAA CATAGTTTTA GATAATACAG AAATAATTTT TAACTATGTA ATAAGGAAAG AGGATGTTAA AGCCATAATT CAAAAAATAA GTAACTACTC TTTATATGCC TTTGAAGAAG ATATAAGACA AGGATATATA ACTATCCAAG GAGGGCATAG AGTTGGATTA GCAGGTCAAT GTGTAATAGA AGATAATTCT ATTAAAACTA TTAGAAATAT AACTTCTTTA AATATTAGAG TTTGTAGAGA AATAGTAGGC TGTTCAAATA GTTTAATGAA TAGCTTAGTA GAAAATAACA GGGTAAATAA TACTTTAATA ATATCTCCAC CTAAATGTGG AAAAACCACA CTTTTAAGAG ATATTACAAG AAATATATCT AATGGAATTT CTCAAATTGG TTTTAAGGGA AAGAGAACAG TTGTAATTGA TGAAAGAAGC GAAATAGCTG CTTGTTACAA TGGAATTCCC CAAATGAATG TAGGAATGAG AACTGATGTA TATGATAACT GCATAAAAAG TGAAGGTATG ATGATGGCTG TAAGAGGGCT TTCTCCAGAG GTTATTATAT GTGATGAGAT TGGGACATAT AAAGATATGG AAGGGTTAAT GATGGCATAT AATTCAGGAG TTAGTATTAT AGCTACATTG CATGGAAGAA ATGTTGAAGA ATTGTATAGG AGACCTGTTT TTAGGGAGAT TGTTGAAAAT AATATAATAA ATAGAGTTGT AGTTCTTAGT GGTAAAAAAG GAATTGGAAC AATTGAGGGT ATATATAATG TTTAA
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Protein sequence | MKEIFDVLPD KINSCLKDKN NLNKLQEIRV KIGKPLNIVL DNTEIIFNYV IRKEDVKAII QKISNYSLYA FEEDIRQGYI TIQGGHRVGL AGQCVIEDNS IKTIRNITSL NIRVCREIVG CSNSLMNSLV ENNRVNNTLI ISPPKCGKTT LLRDITRNIS NGISQIGFKG KRTVVIDERS EIAACYNGIP QMNVGMRTDV YDNCIKSEGM MMAVRGLSPE VIICDEIGTY KDMEGLMMAY NSGVSIIATL HGRNVEELYR RPVFREIVEN NIINRVVVLS GKKGIGTIEG IYNV
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