Gene CPR_1707 details

Gene Information

• Locus tag: CPR_1707
• Symbol: rpe
• ID: 4206212
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: -
• Start bp: 1901925
• End bp: 1902578
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 642566257
• Product: ribulose-phosphate 3-epimerase
• Protein accession: YP_699022
• Protein GI: 110803689
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0036] Pentose-5-phosphate-3-epimerase
• TIGRFAM ID: [TIGR01163] ribulose-phosphate 3-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTAAAA TAGCACCATC AATATTATCA GCAGATTTTA GTATTTTAGG AGAACAAGTT 
AAAAGAGTAG AAAAAGGTGG GGCAGAGTTC TTACATATAG ATGTAATGGA TGGTCATTTT 
GTTCCAAATA TAAGCTTTGG ATTTCCAATA ATGAAAGCTA TAAGGAACTT AAGCAATCTT 
GTTTTTGATG TTCACTTAAT GATAGAAGAG CCAGGAAGAT ATGTAGATGA ATTTATAAGT 
GCAGGAGCAG ATTTAATAAC TGTACATTAT GAATCAGATA GACATATTGA TAGAACAATA 
AATTACATAA AAAGTAAAGG GTGCAAGGCT GGAATAGCGT TAAATCCAGG TACACCAGTT 
TCAATGCTTA AGAATTTAAT ACCTTCATTA GATATGGTAT TAATAATGTC TGTTAATCCA 
GGATTTGGAG GACAAAGCTT TATACCATAT AGTTTAGATA AGATAAAAGA AGTAAAAGAA 
ATAGCTAAGG CTTGTGGTAA GGAAGACTTA TTAATCCAAG TTGATGGAGG AGTAGGTGAA 
AATAATATAA AAGAGATAGT AGAAGCTGGA GCTAATGTTT TAGTTGCTGG ATCAGCTGTA 
TTTAAAGAAG ATAAAATAGA AGAAAACATT AAAGCTTTAA GAGAGGCACT ATAA 

 

Protein sequence

MVKIAPSILS ADFSILGEQV KRVEKGGAEF LHIDVMDGHF VPNISFGFPI MKAIRNLSNL 
VFDVHLMIEE PGRYVDEFIS AGADLITVHY ESDRHIDRTI NYIKSKGCKA GIALNPGTPV 
SMLKNLIPSL DMVLIMSVNP GFGGQSFIPY SLDKIKEVKE IAKACGKEDL LIQVDGGVGE 
NNIKEIVEAG ANVLVAGSAV FKEDKIEENI KALREAL