| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1600 |
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| Symbol | rbsC |
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| ID | 4205514 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1791636 |
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| End bp | 1792217 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642566151 |
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| Product | ribose transport system permease protein rbsC |
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| Protein accession | YP_698916 |
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| Protein GI | 110802637 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.121047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCGA ATGTTAAAGC AAATATATCT AAATATAAAT CTCTTATAGG ACTAGTATTA
TTATGTATAG TTATTACTAT AGTTACTCCA AACTTTTTAA GTGTATCTAA TATAACTAAC
GTATTTACAC AGGTTTCAGT TAATGCAATC ATAGCAATAG GTATGACTTT CGTAATTTTA
ACTGGTGGAA TAGACTTATC AGTTGGATCT ACTTTAGCTA TTAGTGGTGC CATAGGGGCT
TCTATTGTTA AGTCAACTGG AAACGTATTC TTAGCAATTA TAGTGGCAGC TGTTATTGGT
ATAGCAGTTG GATTAATAAA TGGTTTATTA GTATCAAAAG GAAAATTACA AGCATTCATA
GTTACTTTAG CTACAATGAC AATATTTAGA GGAGCTACTT TAGTATTTAC AGATGGTACT
CCAATATCAA AATTACCTGA AGTTTTTGTT AAAATAGGAA ATGGTAAACT TGGATTTATG
CCAATACCAG TTATAATAAC AATAATAATA GCAATCATAG CAGTATATGC TTTATCACAA
ACAAGATTTG GAAGATATTT ATATGCTTTA GGTGGAAATT AA
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| Protein sequence | MKANVKANIS KYKSLIGLVL LCIVITIVTP NFLSVSNITN VFTQVSVNAI IAIGMTFVIL
TGGIDLSVGS TLAISGAIGA SIVKSTGNVF LAIIVAAVIG IAVGLINGLL VSKGKLQAFI
VTLATMTIFR GATLVFTDGT PISKLPEVFV KIGNGKLGFM PIPVIITIII AIIAVYALSQ
TRFGRYLYAL GGN
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