| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1582 |
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| Symbol | |
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| ID | 4204362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1770643 |
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| End bp | 1771617 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642566133 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_698898 |
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| Protein GI | 110801610 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00773707 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAAGG ATATTTTTTC TAAAAGGAGA AACTTAAATA AAAATAATTT TTTGAAAATA
TTTTTAGGAG TTTTAGCAAT TATAATATTA TTATTAGGTG GAATAAAAGT TGTCACAATG
ATAGGCTGCA ATTTAGCTAA TAAGGCTTCA ATTAATAAAG AACAGAAAGA ACAGGAAAAG
GTCATAAAGC CTAATCCAGA TGATGTAATG CCTAGAATGA ATATTACATA TGAAGCAGAT
AAATATTCAG TTGATGCTAA AGATGTACAA GCAATGGCTA ATGATACATA TAAAGGTGAA
GGAAAATATG TATTTTTAAC CTTTGATGAT GGACCATCTA ATTCAACAGA AAAGATATTA
AATATATTAA AAGATAAGAA TGTACATGGA ACATTCTTTG TTTTAGGAAG TAGTATAGAA
AAAGACTCTA AAAGACAAGA GTATTTAAAA GAAGAATTAA AAAGTGGAAA TGCTATTGCA
AACCATAGTT ATAGTCATGA TTTTAAAAAA TTATATCCAG GAAATAAGCT AAAAATTGAT
TCCTTTATGG ATGAGTTTAA TAAGACTAAT GATATAATGA AGAGCATTTT AGGAGGAGAA
TTTGATTGCA AGGTATTAAG AATGCCAGGT GGATATGGAA CAAGAAAATA TTATAAGGAT
CCTTCTCTTA AAGAATTTGA CGATACATTA CAGGAAAATG GAATAATAAA TGTTGATTGG
AATGCCTTAG ATGGTGATGC AGAGGGAAAA CCATATTCTA CAGAAGAAAT GCTTAATTAT
GTGAAAAAAA CATCAAAAGG AAAAAATCAT GTAGTCATTC TTATGCATGA TGCAGCAGGA
AAAGAAAAAA CCGTAGAAAT ATTACCACAA ATAATAGATT ACTACAAGAA TGAAGGATAT
AAGTTTAAAG TTATAAAAAA CACTTCTAAG GAAGAAAACA ATAGCAATCA AAGTGAAAAT
AATAAAGATA AATAG
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| Protein sequence | MSKDIFSKRR NLNKNNFLKI FLGVLAIIIL LLGGIKVVTM IGCNLANKAS INKEQKEQEK
VIKPNPDDVM PRMNITYEAD KYSVDAKDVQ AMANDTYKGE GKYVFLTFDD GPSNSTEKIL
NILKDKNVHG TFFVLGSSIE KDSKRQEYLK EELKSGNAIA NHSYSHDFKK LYPGNKLKID
SFMDEFNKTN DIMKSILGGE FDCKVLRMPG GYGTRKYYKD PSLKEFDDTL QENGIINVDW
NALDGDAEGK PYSTEEMLNY VKKTSKGKNH VVILMHDAAG KEKTVEILPQ IIDYYKNEGY
KFKVIKNTSK EENNSNQSEN NKDK
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