Gene CPR_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1556 
Symbol 
ID4205285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand- 
Start bp1745818 
End bp1746375 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content28% 
IMG OID642566107 
Producthypothetical protein 
Protein accessionYP_698872 
Protein GI110802098 
COG category[S] Function unknown 
COG ID[COG4720] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0381762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ACAAACTATC AATTAAAACA ATTGTAGCTA TAGGAATTGG CTCAGCAGTT 
TTTATGATAT TAGGTAGATT TGGTTCTTTG CCTACAGGAA TTCCTAATAC AAATATAGAA 
ACAGCATATG CTTTTTTATC TTTAATGGCA TTGTTATATG GCCCTTTAGC TGGTTTTTTA 
ATAGGATTCA TAGGACATGC TTTAAAAGAT ATAGTATTCT TTGGATCACC TTGGATAAGT 
TGGGTTTTTG CTTCAGGTAT AGTAGGATTA ATAATTGGAT TTGGAGCTAG ATTTATAAAA 
ATTAATCAAG GGGTATTTAA GTTAAAGCAA ATATTTATGT TTAATTTAAT ACAGATAATT 
GCTAATGGAG TAGCTTGGTT TTTAGTAGCA CCAACTTTAG ATATATTAAT TTACTCTGAA 
CCTTTAAATA AGGTTTATCT ACAAGGGGTA ATTGGCGGAA TTTCTAATAT GATTACTGTT 
GGAGTTTTAG GAACTGTTTT AATATCTAAC TATTCTAAGA CAAGAATAAA AAAAGGTAGC 
TTAAGAAAAG AATATTAG
 
Protein sequence
MKKNKLSIKT IVAIGIGSAV FMILGRFGSL PTGIPNTNIE TAYAFLSLMA LLYGPLAGFL 
IGFIGHALKD IVFFGSPWIS WVFASGIVGL IIGFGARFIK INQGVFKLKQ IFMFNLIQII 
ANGVAWFLVA PTLDILIYSE PLNKVYLQGV IGGISNMITV GVLGTVLISN YSKTRIKKGS 
LRKEY