| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1521 |
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| Symbol | |
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| ID | 4206462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1706686 |
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| End bp | 1707684 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566074 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | YP_698839 |
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| Protein GI | 110801790 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0654867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTTG TGAGTAATCA ATTAAGAAGT GGAAAAAATA ATAAGTATTT AAAAAGAAGA
ATAGCTGTAG CTATAGCTGG TATTGTAGTA ATTGCAGGAG TTGGTTTTGG AATTAAATCA
ATAGTTAGCA ATAAAGCTAA TAAAGAGGCT TTAGCATCAG CTAAAAAAGA AGAAGCTAAA
AAAGAAGAGG AAAAACCAAA ACCAACAGAC ATAATGCCAA ATGGGAATAT AATTTATGCT
GCAGATTCAT ATGCAGTTAG TGCAGATGAA GTTGAAAAAA TGCTTGAAGG AAAAGCTTCA
AATAATGATA AAGAAATATT TTTAACTTTT GATGATGGTC CAAGTGAAAA TACAAGAGAA
ATATTAAAGA TTTTAAAGGA AGAAGATGTA CATGCTACAT TTTTTGATAT AGGATCTGCC
TTAAAGGACA ATAAAGAAAA TCAAGAGTTA TTAAAACAAG AAATTGATCA AGGAAATGCA
GTAGCTGGTC ATAGTTTTTC ACATAATTAT AAAACATTAT ATCCAGGAAA TTCAGTTGAT
GTAAATAAGT TTATGAACGA ATTAAATGAA ACTAATGAAA TAATGAAAAG TGTATTAGGA
AAAAACTTTA ATGCTAGAGT AATTAGAATG CCAGGTGGAT ATATGTCTAG AAGATATTAT
AGAGATCCTA ACTTAAAAGC TTTAGATGAG GCTTTTGCAA AGGATAATAT AGTTAGTATA
GATTGGGATG CAGAAACTGG TGATGCAACT GGAAGACATT ATACAGTAGA GCAATATGTT
CAAAACTCAG CTAAAAATAT TAATACTTTA AATCATGTAA TTTTATTAAT GCATGATGCA
GCAGCTAAAA AAGAAACTGT ACAAGCATTA CCTGCAATAA TTAAATTCTA TAAAGAACAT
GGGTATGCAT TTAAAGTAAT AAAAAATTCA CCTGTAGGTG AAAAAAATTC TTCAGATTCA
ACTAAAGGTT CACAAAATAC TGATAATAAA ACAAAGTAA
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| Protein sequence | MNFVSNQLRS GKNNKYLKRR IAVAIAGIVV IAGVGFGIKS IVSNKANKEA LASAKKEEAK
KEEEKPKPTD IMPNGNIIYA ADSYAVSADE VEKMLEGKAS NNDKEIFLTF DDGPSENTRE
ILKILKEEDV HATFFDIGSA LKDNKENQEL LKQEIDQGNA VAGHSFSHNY KTLYPGNSVD
VNKFMNELNE TNEIMKSVLG KNFNARVIRM PGGYMSRRYY RDPNLKALDE AFAKDNIVSI
DWDAETGDAT GRHYTVEQYV QNSAKNINTL NHVILLMHDA AAKKETVQAL PAIIKFYKEH
GYAFKVIKNS PVGEKNSSDS TKGSQNTDNK TK
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