| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1488 |
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| Symbol | |
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| ID | 4204627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1664463 |
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| End bp | 1665422 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642566042 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_698807 |
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| Protein GI | 110802552 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.373553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAAAG AGACTTTCAG AAAAATAAAA AAGAAAAATT TAGAGAAGAA ATATATACAA
ATAAAAATTG TTGGAGCATT TACTGCTATA GTTGTTTTAG TTTTTTTAGG GACAAGAATT
GCTTTAAATA ATAAAATTGA ATTAGCTAAG GAAAACATAG AAGAAGGAGA AATTAAGGAA
TTAGGTATGG AAGAAGCTAC AGTTGAGCTT CCAAAATATA AATCAACAGA TATTGTTCCA
GGTAGAAATG TTACTTTTTA TGGCAAAAAT TATGCTGTTA ATGCAAAAGA TGTAAGTAAA
ATGATAGAAG GCTCTTATGA TGGGAATGAA AAGTATGTTT TTCTTACTTT TGACGATGGA
CCAAGTCCAA TTACAGAACA GGTTTTAGAT ATATTAAAAA ATGAAAATGT AAAGGGGACT
TTTTTTATGC TAGGTTCTAG ATTAGACTCT GGACAAGCAT CTAAAGATAT TTTGAAAAGG
GCCATAGAAG AAGGAAATGC TATAGCCAAT CATAGTTATA GTCATAATTT TAAAAAGCTT
TATCCAGGAA ATATAACAGA TGTTAATTAT TTCATGGATG AATTTAGAAA AACTAATGAT
GTAATGAGGG GAATTCTTGG TGTTGAGTTT GATACAAATG TTTTAAGAAT GCCAGGAGGC
TATAATAGTA GAGTATATTA TAAGGATAGA AATTTAGAAG AGTTAGATAA TAATTTAGAG
AGCAATAAAA TAATAAGTAT AGATTGGAAT GCTCTAAATG GTGATGCAGA AGGAAAGCCT
TATACTTTAA ATGAAATGAT TGATTATGTA AAAAGAACAT CAAGAGGAAA AAATCAAGTG
GTTTTACTTA TGCATGATAC CTTTGGAAAA GAAAAGATAG TAAAAATATT ACCTGAAATA
ATAAAATATT ATAAAGAAGA AGGGTATGAG TTTAAAACCA TAAGTGATGC TAATGTATAA
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| Protein sequence | MDKETFRKIK KKNLEKKYIQ IKIVGAFTAI VVLVFLGTRI ALNNKIELAK ENIEEGEIKE
LGMEEATVEL PKYKSTDIVP GRNVTFYGKN YAVNAKDVSK MIEGSYDGNE KYVFLTFDDG
PSPITEQVLD ILKNENVKGT FFMLGSRLDS GQASKDILKR AIEEGNAIAN HSYSHNFKKL
YPGNITDVNY FMDEFRKTND VMRGILGVEF DTNVLRMPGG YNSRVYYKDR NLEELDNNLE
SNKIISIDWN ALNGDAEGKP YTLNEMIDYV KRTSRGKNQV VLLMHDTFGK EKIVKILPEI
IKYYKEEGYE FKTISDANV
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