| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1429 |
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| Symbol | nirC |
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| ID | 4204808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1608444 |
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| End bp | 1609241 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565983 |
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| Product | nitrite transporter |
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| Protein accession | YP_698748 |
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| Protein GI | 110801896 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2116] Formate/nitrite family of transporters |
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| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0198898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTAAGG AAGAATTTAA TAATGTTATT GGTGCAGGTA GGAGAAAAAT TGACTTGCTA
AATAATAGTA AGGGACGTTA TTTAGTATAT GCTATGCTTG CAGGACTTTA TGTAAGTTTT
GGAATAATGT TAGCATTTAC TATAGGAGGA ATATTAGATA GTGCAAATTC TCCAAATACT
AAAATAATGA TGGGGGCATC TTTTGGTGTA GCTTTAAGTT TAGTGGTTTT TGCAGGGTCG
GAACTTTTTA CAGGAAATAA TTTTGTAATG ACTATAGGAA TGCTAAATAA AAAAATAACA
TTTAAAGAAT GTTGGAAAAT ATGGGGACTA GCTTACATTG GTAATTTTTT AGGATCTATA
ATAGCCGCTT TAGGTTTTAT AGTTGCAGGT TTAACTAAAG GTAGTGTAAG TGATTTTATG
ATTAAAACTG CGGAAATAAA AATAAGCTTG CCACCAGAGC AGTTATTCAT AAGAGGAATA
TTTTGTAACA TATTAGTATG TTTAGCTGTA TGGTGTACCT TTAGATTAAA AACAGAAACA
TCAAAGTTAA TCATGATATT TTGGTGCCTT TTTGCATTTG TAACATCTGG TTTTGAACAC
AGCATTGCAA ATATGAGCTT ATTAGTAATA GGAAGTATAT TAACAAAGGG AGCTACTATA
ACAGTAGCGG GAAGTTTATA TAATCTATTT TTTGTTACAT TAGGTAATAT ACTAGGTGGT
GTTATTTTAG GTTTAGCATA TTACTATGTA TCTAATAAAA AAGTAGAAAA TAAAAAGATA
GTTTATATTG AAAAATAA
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| Protein sequence | MFKEEFNNVI GAGRRKIDLL NNSKGRYLVY AMLAGLYVSF GIMLAFTIGG ILDSANSPNT
KIMMGASFGV ALSLVVFAGS ELFTGNNFVM TIGMLNKKIT FKECWKIWGL AYIGNFLGSI
IAALGFIVAG LTKGSVSDFM IKTAEIKISL PPEQLFIRGI FCNILVCLAV WCTFRLKTET
SKLIMIFWCL FAFVTSGFEH SIANMSLLVI GSILTKGATI TVAGSLYNLF FVTLGNILGG
VILGLAYYYV SNKKVENKKI VYIEK
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