| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1422 |
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| Symbol | hemC |
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| ID | 4204804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1601492 |
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| End bp | 1602367 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565976 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_698741 |
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| Protein GI | 110801892 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.168494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTAA TAATAGCGAC TAGAAAAAGT AAGTTAGCAC AAGTGCAAAC TGAAAAAGTT
ATGGAACTTT TAAAGAAAAA AGAAAATGTA GATAGTAAAA AGCTTTTAGT TATGACAGAA
GGTGATAGAA GACTAGATGT TTCATTAAAT AAAATAGGTG GAAAGGGTCT ATTTGTAAAG
GAAATAGAAC TAGCTCTTTT AAATAAAGAA GCTCATGGAG CAGTTCATAG TATGAAAGAT
GTTCCTTTTG AACTTCCTAG TGAATTTGAG CTTGTTGCAA TGCCAGAGAG AGAAGATATA
AGAGATGCTT TTGTATCTTT AAATGGATCA ACTTTATCTA ATTTAAGAAA AGGAGCTAGA
ATAGGAACTA GCAGTATAAG ACGTGCAGAG CAGTTAAAGT TATTTAGAGA TGATTTAGAG
ATTGTTCCAA TTAGAGGGAA TGTTCAAACT AGAATCAAAA AAATAACTGA AGAAAATTTA
GATGGAATAA TTTTAGCGGC AGCAGGATTA AAAAGACTTG GTATGGAAGA TGTAATAAGT
GATTATTTTG ATCCAAAGGT ATTTTTACCT GCTATTGGTC AAGGAGCTTT AGGAATAGAG
TGCTTAAAAG ATGGAGAATT TAATGACTAT TTTAAAGCTT TAGATAGCAA AGAAGTTAGA
ACTACTGTTG AGGCTGAAAG AAGCTTTATG AAGGTATTAA ACGGAGGATG TCATAGTCTT
ATAGGTGCTT ATTCAGAAGT TAAAGATAAT GACTTATATA TGATAGGTAC ATTTACTGTA
AATAATAGAA TAGTTAAAAA AGATATATTA GGAAATAAAG AAGATAATAT ATTATTAGGA
AAAAAACTTG CAGAAAAAAT ATTAGGAGAG GTCTAG
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| Protein sequence | MELIIATRKS KLAQVQTEKV MELLKKKENV DSKKLLVMTE GDRRLDVSLN KIGGKGLFVK
EIELALLNKE AHGAVHSMKD VPFELPSEFE LVAMPEREDI RDAFVSLNGS TLSNLRKGAR
IGTSSIRRAE QLKLFRDDLE IVPIRGNVQT RIKKITEENL DGIILAAAGL KRLGMEDVIS
DYFDPKVFLP AIGQGALGIE CLKDGEFNDY FKALDSKEVR TTVEAERSFM KVLNGGCHSL
IGAYSEVKDN DLYMIGTFTV NNRIVKKDIL GNKEDNILLG KKLAEKILGE V
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