| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1413 |
|---|
| Symbol | pcp |
|---|
| ID | 4205313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1588827 |
|---|
| End bp | 1589468 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642565967 |
|---|
| Product | pyrrolidone-carboxylate peptidase |
|---|
| Protein accession | YP_698732 |
|---|
| Protein GI | 110803191 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
|---|
| TIGRFAM ID | [TIGR00504] pyroglutamyl-peptidase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.573171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAT TAATTACAGG ATTTGATTCC TTTGGAGGAG AAAGTATAAA CCCAGCTTTA
GAAGCTGTTA AAATGATACC AGAAAATATA GAAGGAGCTC AGGTTATTAA ATTAGAAATA
CCTACAGTTT TTAGAAAGTC TCTTGAAAAA ATAGAAGAAA AAATAGAGGA AATTAATCCA
GATATAGTTA TTTCTATAGG ACAAGCTGGA GGAAGATTTG GTGTAACTCC AGAAAGAGTA
GCTATAAATA TGGATGATGC GAGAATAGAG GATAATGAAG GGAATCAACC AATAGATATT
TCTATATATG AAGATGGAGA AAGTGCATAC TTTAGTAATT TACCTATAAA AGCAATGGTT
AAGGAAATGG TTGATAATGG AATACCTGCA TCAGTTTCTA ACACAGCTGG AACTTTTGTT
TGTAACCATG TTATGTATGG AGTTTTATAC TTAGTAAATA AAAAGTATAA AAATATAAGA
GCTGGATTTA TACATGTACC TTATATTCCA GCACAAGTTG TAAATAAACC TAATACACCT
TCTATGTCTA TTAATGATAT AGCAAAAGGA TTAGAGCTTA GTATAAAGGC TATAGTTTTA
AATGATAATG ATATTAAAAC TGTAGGAGGA GCTGTTTGTT AA
|
|---|
| Protein sequence | MKVLITGFDS FGGESINPAL EAVKMIPENI EGAQVIKLEI PTVFRKSLEK IEEKIEEINP
DIVISIGQAG GRFGVTPERV AINMDDARIE DNEGNQPIDI SIYEDGESAY FSNLPIKAMV
KEMVDNGIPA SVSNTAGTFV CNHVMYGVLY LVNKKYKNIR AGFIHVPYIP AQVVNKPNTP
SMSINDIAKG LELSIKAIVL NDNDIKTVGG AVC
|
|---|
| |