Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1403 |
Symbol | |
ID | 4205702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1577147 |
End bp | 1578292 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565957 |
Product | aminotransferase, class V |
Protein accession | YP_698722 |
Protein GI | 110802957 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.862736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTTT ATTTTGATAA TAGTTCTACT ACTAAGTCTT TAAAGGAAGT TAGAGATGAA GTTTATTATG CTATGGATGA ATTCTGGGGT AATCCATCAT CTTTACATAA ATTAGGGGTA AAGATGCAAA GAAAGATTGA AGAGCTTCAA GAGAGGATTG CAAAAAAAAT AAATGCTTCT AAGGAAGAAA TAATTTTTAC TTCAGGAGGA AGTGAAAGCA ATAATATGAT TATTAAAGGA TTAGCTAGAG AAAATAATCA TATTATAACT ACAACCTTTG AACATTCTAG TGTTTTAAAC ACTTATAGGG AATTAGAAAA GCAAGGTGTA AGTGTAACAT ATTTAAAGGT TAATAATAAA GGTTTTATAG ATTTAAAAGA ATTAGAAGAG GCAATAAATA AAAATACGAT TTTAGTATCT ATAATGCAGA TTAACAATGA AGTGGGAAGC ATACAAAAGA TTAAGGAAAT AGGAAGATTA ATTAAAGAAA AAAGTAAAAG AGCAAAATTT CATGTAGATG GAGTACAGGG TTTTGGAAAA TTTGAAATTG ATGTTAAGGC ATGTAATATA GATTTTTATT CTGTTTCAGC TCATAAATTT CATGGACCAA AGGGAGTTGG ATTCATGTAT ATGAGAAAGG GGTTAAATTT AAAATCCCTA ATAACTGGTG GAGAACAACA AAGAGGATTA AGGGCAGGAA CGGAAAATAC TCCTTCGTAT ATGGGCATGG TAAAGGCTAT GGATATTGCC TATGATGCCT TAGAAGACTC TTATAATCAT GTAAAAAATC TTAAGGAGTA TTTTATAGAA AAACTTTCTA AAATAGAAAA TGTAGTAATA AATAGTCCTA GTAGTGAAGA ATATAGTCCT TACATATTAA ATGTTTCTTT TTTAGGAACT AGATCAGAGG TTTTACTTCA CATCTTAGAG GAGGATAACA TATTTGTTTC AACAGGGTCA GCCTGTTCTT CAAAAGCTTC CGTAGCCAAG GGAAGTTACG TATTAAATGC TATGGGATTA GAACCAAAGT GCATTCAAGG GGCTATAAGA TTTAGTTTTT CTAGATATAA CACTTTAGAA GAAGTTGATT ACACCATAGC TTCACTAGAA AAAGCTTTAA AATTTTTAAG GAGAATAAAA ATATGA
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Protein sequence | MEVYFDNSST TKSLKEVRDE VYYAMDEFWG NPSSLHKLGV KMQRKIEELQ ERIAKKINAS KEEIIFTSGG SESNNMIIKG LARENNHIIT TTFEHSSVLN TYRELEKQGV SVTYLKVNNK GFIDLKELEE AINKNTILVS IMQINNEVGS IQKIKEIGRL IKEKSKRAKF HVDGVQGFGK FEIDVKACNI DFYSVSAHKF HGPKGVGFMY MRKGLNLKSL ITGGEQQRGL RAGTENTPSY MGMVKAMDIA YDALEDSYNH VKNLKEYFIE KLSKIENVVI NSPSSEEYSP YILNVSFLGT RSEVLLHILE EDNIFVSTGS ACSSKASVAK GSYVLNAMGL EPKCIQGAIR FSFSRYNTLE EVDYTIASLE KALKFLRRIK I
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