| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1364 |
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| Symbol | |
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| ID | 4204696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1535635 |
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| End bp | 1536330 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642565918 |
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| Product | putative proton-coupled thiamine transporter YuaJ |
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| Protein accession | YP_698684 |
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| Protein GI | 110802309 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3859] Predicted membrane protein |
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| TIGRFAM ID | [TIGR02357] probable proton-coupled thiamine transporter YuaJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0128009 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGTCAT TTTCACAAAT AATAAATGAT TTTATTCAAA GTTTTTCATC AATTAATTTA
GGAGGAAATT TTAAGGAGAT TGTAACTAAT CCACTAACAA TTCTCACTTT AATAGGAGTC
CTAATAATAT TAGTTTTACT TATAAAGGCT AAAGACATCA AATTTGATGC AAAAATGCTT
ACAACAATAG GAATTGCTTT AGCACTTACT GCTGTATTAA ACATGCTAAA GATATACAAA
TTTCCTCAAG GTGGAGGAAT AACTTTAGGT AGTATAATTC CTATAATACT TATTTCTTAT
GCTTATGGTC CATTAGTTGG AATGCTTACT GGATTTTTAT TCGGTATAAT TTCCTTATTT
ATAGATCCAT ACATACTTCA TCCTGTACAA GTATTATTTG ATTATCCTAT ACCATATATG
GCATTAGGAG TAGCAGGATT CTTTAAAAAT CATAGAATTT CAGGAGCTAT AATAGCAATA
TTTTTAAAAT TTTTGGCTCA CTTTATTTCT GGAGTTGTTT TCTTTGGAGC CTTTGCTCCT
AAAGGAATGT CTCCAATTCT ATATTCATTT TTAGTAAATG GTTCTTTAAT AGGAGCTGAT
GGTTTAATAT GTGTAGTACT TTTATGTATT TTACCTGTTA ATAGACTTAT TAAAGCCATA
AGTTCTAAAA GCGTAACAAG CAAATACACA TCTTAA
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| Protein sequence | MMSFSQIIND FIQSFSSINL GGNFKEIVTN PLTILTLIGV LIILVLLIKA KDIKFDAKML
TTIGIALALT AVLNMLKIYK FPQGGGITLG SIIPIILISY AYGPLVGMLT GFLFGIISLF
IDPYILHPVQ VLFDYPIPYM ALGVAGFFKN HRISGAIIAI FLKFLAHFIS GVVFFGAFAP
KGMSPILYSF LVNGSLIGAD GLICVVLLCI LPVNRLIKAI SSKSVTSKYT S
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