| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1279 |
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| Symbol | |
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| ID | 4204969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1445426 |
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| End bp | 1446814 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642565835 |
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| Product | tetracycline resistance protein, putative |
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| Protein accession | YP_698601 |
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| Protein GI | 110802870 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000123151 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACATTT CACTTAATAC TTTAAAAAAT GTTGAAGAAG TAAAAATAAA AAAAGCGGTA
CCTGCTGTAT TGGCTTTAAT GATTTTTGCT TTAGTTATTG ACAACTCATT TAAAATTATT
TCACCAGATT TGGCTAAAGC TTTTAACATA TCAGCTACTG CTGTTAGTTG GCAAGCAACT
TTAGCTGGAT TAGTTATTGG TATTGGAGCT ATTGTATATG CTTCTTTATC TGATTCAGTA
AGTGTTAGAA CTTTATTGGT ACTAGGAATT ATATTAATAT GTGTTGGTTC ACTATTAGGA
TTTATTTTTC AGAAATCATT TTTAATTATT GTTATTTCAA GAATAATTCA GTCAGCTGGA
TTAGGAAGTG CAGAGACATT ATATGTAATA TTTATAGCAA AGTATTTTAA AGAGAGTGAA
CATAAAAAAT ACTTAGGATT TAGTACAAGT AGTTACGCTA TTTCACAGGT AATTGGTACA
ATTACTGGAG GATATATTTC AACATATTTA AGTTGGCAAG TACTATTTTT AATTCCATTA
TTAACTTTAG TGATAATACC TTTTATATTA AAATATATTC CTAAGGAAAA GAATAGAGCT
GGTAATGTGG ATTATATAGG ATTTATATTA GTTGCAACAG TTGCAGCAAC ATTAATGATC
TTTGTTTCAG GATTCCAATG GGAAGTTTTA ATAGGATTTA TAGTTGCACT TATATTATTC
CTTATATACA TAAGTAAAAA TGAAAATGCT TTTATAAGCA TTAAATTTTT CACAAATAGA
AACTTTATAT CAGTATTACT TGTAGCTTTT GTTATATATA GTGTACAACT TGCATTTATA
TTTATGTTTC CATTCTTAGT TGAATCTATA TATCATTATA GATTAGACCA AATTTCATTA
CTTTTAGTTC CTTCATATGT TTTAGCTGCT ACTGTAGGAG CTTTATCAGG AAAGGTTTCT
AAGAAAATAG GAAGTAAGCA ATGTATTCAA ATGGCTATAT TAGGTATAAT AGTAAGTCTT
ATTGTAGGAG CTTTATTTGT AAAAACATCA GTTTTAGTAT TTATTTTTGT AATGATACTA
TTCTCAAGTT CATTTGCTTT AATGTATGCA CCTATGATTG ATACATTAAC AAGAACAATA
CCTAAGGAAA AAACAGGAAC TGCTATTGGT TTCTATAATT TCTGTTTAAA TATAGCTACT
TCAATAGGAA TAACATATGT AGCAATACTT ATGGAAAATA AATATTTAGG AAAGAACTTT
ACTGGACTTT TCAGTGACTT AGTAGCTATA CAATATAGTA ATGTTTTATT AGTATTAGCA
GTTATATCTT TAGTATCACT TTTATTATAC TGGACTTTAA TTGGAAGAAG AGAGAAAAAG
GCAATATAA
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| Protein sequence | MDISLNTLKN VEEVKIKKAV PAVLALMIFA LVIDNSFKII SPDLAKAFNI SATAVSWQAT
LAGLVIGIGA IVYASLSDSV SVRTLLVLGI ILICVGSLLG FIFQKSFLII VISRIIQSAG
LGSAETLYVI FIAKYFKESE HKKYLGFSTS SYAISQVIGT ITGGYISTYL SWQVLFLIPL
LTLVIIPFIL KYIPKEKNRA GNVDYIGFIL VATVAATLMI FVSGFQWEVL IGFIVALILF
LIYISKNENA FISIKFFTNR NFISVLLVAF VIYSVQLAFI FMFPFLVESI YHYRLDQISL
LLVPSYVLAA TVGALSGKVS KKIGSKQCIQ MAILGIIVSL IVGALFVKTS VLVFIFVMIL
FSSSFALMYA PMIDTLTRTI PKEKTGTAIG FYNFCLNIAT SIGITYVAIL MENKYLGKNF
TGLFSDLVAI QYSNVLLVLA VISLVSLLLY WTLIGRREKK AI
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