Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1267 |
Symbol | |
ID | 4205000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1426910 |
End bp | 1427824 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565823 |
Product | hypothetical protein |
Protein accession | YP_698589 |
Protein GI | 110803249 |
COG category | [V] Defense mechanisms |
COG ID | [COG3440] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATAGAG TTAAATCATG GGAGTATGAT GATATTGATA ATAAATTTGC CATAAAGGAT TTAGATAAAT CCTCATTTAA GAGAGGAAGC CATATACCAA TAAAGGTTAG AAAGGTTTTT GAATGTGAAG ATATTAAATA TGGAGATAAG AAGAAAATAA CTCTTATATA CAAAGGGGAA GCCTTTGAAG CTGAAATAGA AGGGGAAATT AAAGGTGGAA TACGAATGAA TTGGCCAAAG TTAATACCTA AAATGAAGGA AGTTTTTAAA AATGAAATAA ATGACTTTGA AGATTCTAAA GAGCTTAGTG TAAGAGTGCC TAGATTGAAA TTTACAAAGG AAACAGCCAT AAAATATGAT GTGGAAATGA AAACTAAATA TAGTCATGAT GTTCTTTGTG AGTTAGAAAG GCTAGATATA GATGTTGAAA ACAAAACCAT AGAAGAAATA AATGAAGTGG GAGAAGTCAT AGAGAGGGTT GTTAAGGCTA GAAAAAATCA AAACAAATTT AGAGAAGAAC TATTTAAAAG AGAGAGTAAG TGTAAAATTT GTGGACTAGC TCATAAGGAG CTTTTAATAG CAAGCCATAT AAAACCTTGG AGCAAAAGTA CACCAGAGGA AAAGCTAAAT CCCTTTAATG GATTCTTACT ATGCCCAAAT CATGATTCCT TATTTGATAA GCATTTAATA AGCTTTAGGG ATAATGGAGA AATCATAATA TCTAAAAGGC TCTCAGAAAA GGAGCAGGAG CTATTAAATA TAAATAAGGA TATTGTGATT AATATTGAAG AGGAAAATAA GAAGTTTTTA AAGGAGCATA GAGATGTCTT TTATGAAATA GAGAAGGCTT ATGATTTAGA GAAAGAGTTG TCAATAAGCA ATAAGGAAAT ATATAAGGTT GAATTAGAAG TTTAA
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Protein sequence | MDRVKSWEYD DIDNKFAIKD LDKSSFKRGS HIPIKVRKVF ECEDIKYGDK KKITLIYKGE AFEAEIEGEI KGGIRMNWPK LIPKMKEVFK NEINDFEDSK ELSVRVPRLK FTKETAIKYD VEMKTKYSHD VLCELERLDI DVENKTIEEI NEVGEVIERV VKARKNQNKF REELFKRESK CKICGLAHKE LLIASHIKPW SKSTPEEKLN PFNGFLLCPN HDSLFDKHLI SFRDNGEIII SKRLSEKEQE LLNINKDIVI NIEEENKKFL KEHRDVFYEI EKAYDLEKEL SISNKEIYKV ELEV
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