| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1231 |
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| Symbol | |
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| ID | 4204323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1383054 |
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| End bp | 1384451 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565787 |
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| Product | dipeptidase PepV |
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| Protein accession | YP_698553 |
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| Protein GI | 110801474 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01887] dipeptidase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00676632 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATTTAA TAAGTAGCAA AATTGATGAA ATGAAAGATG ATTTAATTCA ATCAGTACAA
AATATTATTA GAATCAAAAG TGTTGAGGAT GAACCAAAAG AAGGTATGCC TTTTGGAGAA
GGAGTTTCTA AATCTTTAGA ATATGCCTTG GAAGTTTCAA AAAAATTAGG ATTTAAAGTA
GTTAATTTAA ATGGACATGT AGGATATGCT GAATATGGTG ATGGAGAAGA ATATGTAGCA
GCTTTAGGAC ATTTAGATGT AGTTCCAGAA GGTGATGATT GGATTTATCC ACCATATGGA
GCAGAAATAC ATGATGGAAA AATATATGGA AGAGGTACAA CTGATGACAA AGGTCCAATA
ATGGCATCAT TATATGGATT AAAAGCTATA AAAGAATTAG GATTACCAAT ATCAAAGAAA
ATAAGAATAA TATTTGGTAC TAATGAAGAG ACTGGAAGCA AGGATATAGA ATACTATTTA
GAACATGAAA AGGCTCCAGT TTTAGGGTTT ACTCCTGACG CAGAATTCCC TATAATAAAT
GGAGAAAAGG GTATCACTAT TTTTGATATT GTTAAAAATT TTGGAGAAAA AACAACTGAT
GGAGATGTAT TAGTTGAGAG TATAAAGGGT GGAATAGCAT CAAATGTAGT TGCTAGTCTT
TGTGAAACAA AATTAAGAGC TAAGGAAGCA AATAAGGTTT GTGAAGAAAT ATCAAAATTT
GCTAAAGAAA GTAATATAAA GTTTGAAGTA TCACATAAAA ATGATGAAAT AGAGTTAAAA
GTATTTGGTG TCTCAGCTCA TGGTAGTACT CCAGAAAAGG GTATAAACGC TATAATGCAA
ACTATTAAAA TTTTATCAGA GTTAAATTTA GCACAAGAAG ATATAAAAGA TTTTATTAAA
TTCTTAAATG ATAACATAGG TGAAGATGTC TATGGAGAAA AATTCGGAAT TTTATTACAA
GATGAAGCAT CAGGAAAATT AAGCTTTAAT GTTGGAGTAA TTGACTTAAA TGATAAAGTA
GGTAGGCTTA CTTTAAACTT AAGATATCCT GTAACTAAGA CTTTAGATGA TATGATGATT
CCTTTTAATG AAAGAATAAA AGGTACTTGT ATAGAAATAG AAAACTTTAA ACATCAAAAA
CCATTATATT TCTCTCCAGA TCATCCTTTA ATAAAGACTT TAAAGAGTGT ATATAAAGAA
GAGACAGGAA CAGAAGGAGA ATTAATTTCT ATTGGAGGAG GAACATATGC TAAGGAAATG
CCTAATATAG TAGCATTTGG ACCAATATTC CCTGGAGAAC CAGATGTTAT TCATAAACCA
AATGAATATA TTAAAATAGA CGACTTAATT TTAATAAGTA AAATATATGC AAAAGCTTTA
TATCAATTAG CTAAATAA
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| Protein sequence | MNLISSKIDE MKDDLIQSVQ NIIRIKSVED EPKEGMPFGE GVSKSLEYAL EVSKKLGFKV
VNLNGHVGYA EYGDGEEYVA ALGHLDVVPE GDDWIYPPYG AEIHDGKIYG RGTTDDKGPI
MASLYGLKAI KELGLPISKK IRIIFGTNEE TGSKDIEYYL EHEKAPVLGF TPDAEFPIIN
GEKGITIFDI VKNFGEKTTD GDVLVESIKG GIASNVVASL CETKLRAKEA NKVCEEISKF
AKESNIKFEV SHKNDEIELK VFGVSAHGST PEKGINAIMQ TIKILSELNL AQEDIKDFIK
FLNDNIGEDV YGEKFGILLQ DEASGKLSFN VGVIDLNDKV GRLTLNLRYP VTKTLDDMMI
PFNERIKGTC IEIENFKHQK PLYFSPDHPL IKTLKSVYKE ETGTEGELIS IGGGTYAKEM
PNIVAFGPIF PGEPDVIHKP NEYIKIDDLI LISKIYAKAL YQLAK
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