| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1217 |
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| Symbol | |
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| ID | 4205055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | - |
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| Start bp | 1367628 |
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| End bp | 1369973 |
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| Gene Length | 2346 bp |
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| Protein Length | 781 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642565773 |
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| Product | ATP-dependent helicase, putative |
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| Protein accession | YP_698539 |
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| Protein GI | 110801697 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.11747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAATG AATTAATAAA GATTTCTATA AGAAACTTAG TTGAATTTGT TTTAAGAAGA
GGGAGTATAG ATAGTCGTAT AAAAGCATCT GTAAGAGCTT TAGAAGGAAT AAAGGGACAC
AAGAAAATAC AGAGTTCTTA TTCTGAAAAG GATAGGGCTG AAGTTACCTT AAAAAAGGAT
ATTGATTTTG AAGATTTTAC TTTAAGGGTG GAAGGGAGAG CAGATGGAAT ATTAGAAGAA
AATGAAAAAA TAATTATTGA TGAAATAAAA ACTACTACAA AAAACGTAAT GGATATAGAT
TATGATTTTA ATGAATTGCA TTGGGCTCAG GCTAAAGTAT ATGCTTATAT ATACAGCAAA
GAGAAAAATT TAGACTCAAT AATAGTGCAG TTAACTTATT ATAATGTTGA AGATTTTGGA
ACAAAGTTTT TAAGGAAAGA ATATAGTTTT CATGGACTTA GAGAGTTTTT CTATGATTTA
ATAGAAAAAT ATAAAGAGTG GATACTTTTA GAGAAAAAAT GGATAGACTT TAGAAATGAT
TCTATAGAAA GTTTTAATTT CCCTTTTAAG TATTATAGAA AGGGGCAAAG AGAACTAGCT
ATTAGAGTTT ATAAGTCTAT TACAGAGGGG AAAAAATGTT TTGCAGAAGC ACCTACTGGC
ACTGGAAAAA CAATGTCTAC ATTATTTCCT GCCGTAAAAG CTTTAGGCGC TAAGGAAACT
CAAAAAATTT TTTATATAAC TGCTAAAACT ACCACAAGAG AAATTGCAAG TAATACTTTG
CGTATTATGA GAGAAAAAGG ATTAAGTCTA AGAAGTGTTA ATATAACTGC AAAGGAAAAA
TGTTGCAAGA TGGAAGAAAA AAAGTGTATT CCAGAATATT GTCCTTATGC TAATGGATAC
TTTGATAGGG TTAATATTGC TTTAAAGGAA GCACTAAAGC ATAAGGAAGA ATATGATTTA
GAATATATAA ATAAATTATC TGAGGAATAT AATATTTGTC CCTTTGAATT TTCTCTTGAG
CTAAGTAATT TTTGTGATGT AGTAATATGT GATTATAATT ACATATTTGA TCCTCAGGCT
TCTTTAAAGG GAATATTAGA AGGAAAAGCC AAGGATTATA CAATTTTAAT AGATGAAGCT
CATAATCTTT TAGATAGGGG AAGAAGTATG TATTCTTCCA AAATATTTAA AGATGATTTT
TTAAAGCTAA AAAGAGAATT TAAAAGTAAG GATAAGGGAA TATATAACTC TTTAGATAGG
GCTAATAAAT ATTTAATAGA AAAAAGAAAG GTTTTAGAAA ATTTAGAAAC TAAAAGTCTT
GTAGAAAAAG AAGAACCAAG TGATTTATAT GGAATTTTAA GAGGCTTTTT AGAAAAGGTA
GATATTTATG AGAGTAAATC TAGTGAAGAG AATTCAAATC TTTTAGAGTT ATATTTTAAT
GTTTATGAAT TCTTGAATAT ATGTTCTTAT TATGGAGAAG ATTTTACTAC TTTATATAAA
TTGGATGGAA ATAATTTAGA ATTATCAATC AACTGTTTAG ATCCATCTAG GATACTTAAA
AGTATAATGA ATAGGTTTAA ATCAGTTATA ATATTTTCAG CTACTCTTCT TCCTATGGAG
TATTTTAAAG AACTTTATGG AGCACAGGAA GGAGATTATT CTGTTAATTT ATCTTCTCCC
TTTGATTATA AAAATAAGCT TACTATAGTT GGAAAGGATG TATCAACAAC CTATTCTAAT
AGAAAGAAAA CTCTTCCTAA AATAGTTAAT TACATAATAG AATGTGCTAA AAGTAAGAGA
GGCAACTATC TTGTATTTTT CCCTTCTTAT GAATATATGT GGATGGTTCA TGAGGAAATT
AAAAAAAGAA AAGTTGATTT TAGTTTAGTA GCTCAAGGGG ACCACATGAA GGAAGAGGAA
AAAGAAGAGT TTTTATCTTT ATTTAAAGAA GGGGGAGAAA AAACACATCT TGGCTTAGCT
GTTTTAGGTG GGCATTTTTC AGAGGGAATA GATTTAACTT TAGATAAACT TATTGGAGTT
ATAATTATTG GAGTTGGTAT GCCTAAAATT TGCTTAGAGA GAGAAAGTAT AAAAGAATAT
TATAACTCTA TAGGTAAAAA TGGTTTTGAC TATGCCTATG TTTATCCTGG AATAATTAAG
GTGCTTCAAG CAGCGGGAAG ATGTATAAGA ACAGAAAAAG ATAAGGGGGT AGTACTTTTA
TTAGATGATA GATACTTTAC AAATAAATAT AAGAGTCTAC TTCCAAGAGA ATGGTTTTTA
AATATTTTAG TAGAAAGTGA AGAAGGAATT AAAAACACTT TCGAAAATTT TTGGAAGGAA
GTTTAA
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| Protein sequence | MKNELIKISI RNLVEFVLRR GSIDSRIKAS VRALEGIKGH KKIQSSYSEK DRAEVTLKKD
IDFEDFTLRV EGRADGILEE NEKIIIDEIK TTTKNVMDID YDFNELHWAQ AKVYAYIYSK
EKNLDSIIVQ LTYYNVEDFG TKFLRKEYSF HGLREFFYDL IEKYKEWILL EKKWIDFRND
SIESFNFPFK YYRKGQRELA IRVYKSITEG KKCFAEAPTG TGKTMSTLFP AVKALGAKET
QKIFYITAKT TTREIASNTL RIMREKGLSL RSVNITAKEK CCKMEEKKCI PEYCPYANGY
FDRVNIALKE ALKHKEEYDL EYINKLSEEY NICPFEFSLE LSNFCDVVIC DYNYIFDPQA
SLKGILEGKA KDYTILIDEA HNLLDRGRSM YSSKIFKDDF LKLKREFKSK DKGIYNSLDR
ANKYLIEKRK VLENLETKSL VEKEEPSDLY GILRGFLEKV DIYESKSSEE NSNLLELYFN
VYEFLNICSY YGEDFTTLYK LDGNNLELSI NCLDPSRILK SIMNRFKSVI IFSATLLPME
YFKELYGAQE GDYSVNLSSP FDYKNKLTIV GKDVSTTYSN RKKTLPKIVN YIIECAKSKR
GNYLVFFPSY EYMWMVHEEI KKRKVDFSLV AQGDHMKEEE KEEFLSLFKE GGEKTHLGLA
VLGGHFSEGI DLTLDKLIGV IIIGVGMPKI CLERESIKEY YNSIGKNGFD YAYVYPGIIK
VLQAAGRCIR TEKDKGVVLL LDDRYFTNKY KSLLPREWFL NILVESEEGI KNTFENFWKE
V
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