| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1171 |
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| Symbol | mutS |
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| ID | 4206504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1317994 |
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| End bp | 1320726 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642565727 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_698493 |
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| Protein GI | 110803440 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTAA CGCCTATGAT GCGTCAGTAT TTTGAAATAA AGGAAAATTA TAAGGATTGT
ATTCTATTTT TTAGACTTGG AGACTTCTAT GAGATGTTCT TTGAGGATGC AGAAACAGCT
GCAAGGGAAT TAGAATTAGT TCTTACTGGA AGAGATTGTG GCTTAGAAAA AAGAGCACCT
ATGTGTGGAA TTCCGTTTCA TGCATCTAAT TCATATATAG GAAGATTAGT AGCTAAAGGA
TATAAGGTTG CTATTTGTGA ACAAGTTGAA GATCCTAAAG TTGCTAAAGG AATTGTTAAA
AGGGATGTTA TAAAGGTTAT AACTCCTGGA ACATATACAG ATTCTTCTTT TGTTGAGGAA
ACAAAGAACA ATTATATAAT GACTATATAT TCAGATTTAG AGAGAAATAG ATGTTCACTA
GCTATAACAG ATATTTCTAC TGGAGATTTC TTAGCTACAG AGGGAGAGTT AGAAAAGGGA
GTTATTTTAG ATGAAATATC TAAGTTTAAT CCTAAAGAAA TAATACTTTT AGATTCTTTA
GATCAAGAGC TTATAAAAGA TATAACATTA ACTACTCCAG CCTTAATAAG TAGAAAGCCT
ATAGAATATT TTGAAGAAAA ATTTGAGGAA GTATTAAATT CTCAATTTGG AGAAAAATCA
AACTCTCTAA GTTTAATGAT TAAGAAATCA AGTAATGCTT TAGTTAAATA CATACTAGAT
ACTCAAAAAA TAAGCTTAAC TAATATAAAT GATATAGAAG TATATAGTTT GGTTGATTTT
ATGACTATAG ATTTAAGTTC TAGAAGAAAT TTAGAGCTTA CAGAGAATTT AAGAGAAAAA
AGCAAGAAAG GTTCTCTTCT TTGGGTATTA GATAAGACAG AAACTTCTAT GGGAAGTAGA
ATGCTTAGAA GATGGATTGA AGAACCTCTT GTTAATAAGG AAAAGATAAC TTTAAGATTA
AATGCTGTTG AAGAATTATT TAATGATCTT TCTTTAAACG ACTCTCTTAA AGAAGCTTTA
CATGATATTT ATGATATAGA GAGAATATTA GGTAAAATTT CAAACAAGAA TGCTAATGCT
AAGGATTTAA TAGCATTAAA AACTTCTATA GGTAAAATTC CTAATGTAAA AGGAATTATA
GAAAATTGTA CTTCAAGTCT TCTAAAAAAT TATCACCATA ATTTAGATGA TTTAAGAGAT
ATTTATGAGC TTTTAGAAAA ATCTATAAAA GAAGATCCCT CTCTAACATT AAAAGACGGT
GATTTAATAA AGGATGGATT TAATGGTGAA ATAGATGAAT TAAGACTTGC TAAGACTAAC
GGTAAGGATT GGATATCTAG TTTAGAAAAT AGAGAAAGAG AGTTTACTGG CATAAAATCT
TTAAAGGTAG GATTTAATAA GGTTTTTGGT TATTATATAG AAATATCTAA GGCTAATTAT
AGTTCTATTC CTGAAGGAAG ATATATAAGA AAGCAAACTT TAGCTAATGC AGAGAGATTT
ATTACTCCAG AACTTAAGGA AATAGAAGAA AAACTTTTAG GAGCTAGTGA AAAACTTTGC
TCTTTAGAAT ATGATATTTT CCTAGATATA AGAAATGAAG TTGAAAATCA TATAGATAGG
TTAAAGACTA CTGCTAAGAT AATTGCTGAA CTAGATTGTA TAAGCAATTT AGCCTTTGTA
GCTTTAGAAA ATGATTTTAT AAAACCTGAA ATTAATGAAG ATGGGGAAAC TAAAATAGAA
AATGGAAGAC ACCCTGTTGT TGAAAAGGTA ATTCCTAAGG GAGAGTTTAT TCCTAATGAC
ACTATTATAA ATAAAGATGA TAATCAACTT CTTATAATAA CAGGTCCTAA TATGGCTGGT
AAATCAACAT ATATGAGACA GGTAGCTATT ATTACTTTAA TGTGTCAAAT AGGTTCTTTT
GTGCCAGCTA GTAAGGCTAA TATAAGTGTA GTAGATAAAA TCTTTACTAG AATAGGAGCT
TCTGATGATT TAGCAGGTGG TAAAAGTACA TTTATGGTTG AAATGTGGGA AGTTTCTAAC
ATTTTAAAAA ATGCTACAGA AAATAGCTTG GTTCTTTTAG ATGAAGTTGG AAGAGGAACG
AGTACATATG ATGGATTAAG TATAGCTTGG TCTGTTATAG AGTATATATG TAAGAATAAA
AATTTAAGAT GTAAAACTCT TTTTGCTACT CATTATCATG AGTTAACTAA ATTAGAAGGA
GAAATTCACG GAGTTAGAAA CTATTCAGTA GCTGTGAAGG AAGTTGATAA CAATATTATC
TTCTTAAGAA AAATAATAGA AGGTGGAGCA GATCAATCTT ATGGTATTGA GGTTGCTAAA
CTTGCTGGTA TTCCAGACGA GGTAATAAAT AGAGCTAAGG AAATCTTAGA AACTCTTGAA
ATGGAATCTT CAAAGGATAA CTTAGATTTA GCTCTTAAAG AAGTAAATGC TTCAAAAGAA
GAAATGAAGG AAGCCTCTAT TGAAGCCTCC TATGAAGTTA AAGAAACCAT AGTAGAAGAG
GATAAAATTG AGATTATAGA AGAAATTATT TCAAAATCTT CGGATGCTAA AACACATAAA
AAAGAAGATG ATCAAATACA ATTAGATTTT TCTGCCATAG GAAAAGATAA TTTGATAAAA
GAACTTTCAG AAGTTGATAT TTTATCTTTA AATCCTATGG AGGCTATGAA TAGATTATAT
GCTCTAGTTA AAGAAGCTAA AAATTTAATT TAG
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| Protein sequence | MALTPMMRQY FEIKENYKDC ILFFRLGDFY EMFFEDAETA ARELELVLTG RDCGLEKRAP
MCGIPFHASN SYIGRLVAKG YKVAICEQVE DPKVAKGIVK RDVIKVITPG TYTDSSFVEE
TKNNYIMTIY SDLERNRCSL AITDISTGDF LATEGELEKG VILDEISKFN PKEIILLDSL
DQELIKDITL TTPALISRKP IEYFEEKFEE VLNSQFGEKS NSLSLMIKKS SNALVKYILD
TQKISLTNIN DIEVYSLVDF MTIDLSSRRN LELTENLREK SKKGSLLWVL DKTETSMGSR
MLRRWIEEPL VNKEKITLRL NAVEELFNDL SLNDSLKEAL HDIYDIERIL GKISNKNANA
KDLIALKTSI GKIPNVKGII ENCTSSLLKN YHHNLDDLRD IYELLEKSIK EDPSLTLKDG
DLIKDGFNGE IDELRLAKTN GKDWISSLEN REREFTGIKS LKVGFNKVFG YYIEISKANY
SSIPEGRYIR KQTLANAERF ITPELKEIEE KLLGASEKLC SLEYDIFLDI RNEVENHIDR
LKTTAKIIAE LDCISNLAFV ALENDFIKPE INEDGETKIE NGRHPVVEKV IPKGEFIPND
TIINKDDNQL LIITGPNMAG KSTYMRQVAI ITLMCQIGSF VPASKANISV VDKIFTRIGA
SDDLAGGKST FMVEMWEVSN ILKNATENSL VLLDEVGRGT STYDGLSIAW SVIEYICKNK
NLRCKTLFAT HYHELTKLEG EIHGVRNYSV AVKEVDNNII FLRKIIEGGA DQSYGIEVAK
LAGIPDEVIN RAKEILETLE MESSKDNLDL ALKEVNASKE EMKEASIEAS YEVKETIVEE
DKIEIIEEII SKSSDAKTHK KEDDQIQLDF SAIGKDNLIK ELSEVDILSL NPMEAMNRLY
ALVKEAKNLI
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