| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_1070 |
|---|
| Symbol | |
|---|
| ID | 4205754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1218796 |
|---|
| End bp | 1219275 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642565626 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_698392 |
|---|
| Protein GI | 110802595 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000222922 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAAATA AAAGATATGA ATCACTATCA ACAGAGCCAG AAAAACTTCC ATTTATTGAT
AGACTAGTTG CTGATAGCCG CCAAGTAGCA CTAAATCACA CTGCTGGGCT TTCACCCCCT
CAACAAGTGC AAATGGCCTT CTTTTCTGCA TTCTCTTTAG TTGATAAAGA AAATACATAT
AAAAATCAAA CTATTGATAT ATGCCACAGA CGTCAAAAAT TATTATTTGA AGGACTAGAC
TTACCGATTA AAGAAAATCC ATATGATGCA TCATATTATG CTGAGTTTGA TTTATTGCAA
TGGGCTCTTA AAAATTATGG TCCTGAATTT GCAAATTATT TAGAATCAAA TTATAAACCT
GTAGATGTTT TATATAAATT AGCTGAGGAA TCATCTATTG TCTTATTAAG CGGTGGTGGA
TTCCAAGGGC CTGAATGGTC AGTAAGAATA TCTTTAGCTA ATTTATTAAA CTTTAATTAA
|
|---|
| Protein sequence | MVNKRYESLS TEPEKLPFID RLVADSRQVA LNHTAGLSPP QQVQMAFFSA FSLVDKENTY
KNQTIDICHR RQKLLFEGLD LPIKENPYDA SYYAEFDLLQ WALKNYGPEF ANYLESNYKP
VDVLYKLAEE SSIVLLSGGG FQGPEWSVRI SLANLLNFN
|
|---|
| |