Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1064 |
Symbol | |
ID | 4205258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 1212228 |
End bp | 1212488 |
Gene Length | 261 bp |
Protein Length | 86 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642565620 |
Product | peptidase, putative, truncation |
Protein accession | YP_698386 |
Protein GI | 110802071 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1363] Cellulase M and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.357611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTAGAGG ATATAACTAA ATTTATAGTA GTAGATATGG GGTGTATTGG TGATGATTTA AGTTGCACAG AGTATGATGT TTCTATTTGT GCAAAGGATT CAGGTGGAGC TTATGACTAT AAAATTACAT CAGATCTTAT AGAATTAGCT AAAAATAATA ATTTAAGCTA TGCAGTAGAC ATATACCCTA GATATGGTTC AGATGTTGGA GCTGCCTTAC GAGGTGGAAA TAACATAAAA GGTGGGCTTA TAGGCTCTTG A
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Protein sequence | MLEDITKFIV VDMGCIGDDL SCTEYDVSIC AKDSGGAYDY KITSDLIELA KNNNLSYAVD IYPRYGSDVG AALRGGNNIK GGLIGS
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