Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_1028 |
Symbol | |
ID | 4206259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 1170213 |
End bp | 1170803 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 23% |
IMG OID | 642565585 |
Product | putative metal-dependent hydrolase, membrane-bound |
Protein accession | YP_698351 |
Protein GI | 110803658 |
COG category | [R] General function prediction only |
COG ID | [COG1988] Predicted membrane-bound metal-dependent hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.508363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAG AAACTCATTC AACTGGAGGC GTATGCATTT CTTTAATAAT GCTAAATACA ATTTTAAGCC TATTCTTATT TCCATATGAT CTAGCTTATA AAATTTTATT AATAGCATTA TTTTTTCATT TTTCTTATAT AGGATCTCTA TTTCCTGATA TAGATCAAAG AAAATCTTCA ATTAGTCAAA TGTATCCTTT TCTTTCAAAG CATATAGGTA GTAAATGTAG ACATCGTGGC TTTACTCATA GTTTACTATG TCTATCTTTA ACTATATTAA CCTTATATAT TGTTTTAAAT ATTAGTAACT TCAACATAAT ATTATTAATA ATTTCAATAG GATTTATAGC TGGATATATA TCCCACTTAA TTTTAGATTT TTTAACTTCA GAAGGAATAG AACTTTTCTA TCCTTGGAAA ACTAACTTTA AAATAGCTAA AATTAAAACA GGATCAAAAA CTGAAAAGAT AATAAATAAA GTACTAAAAA TATTTAATTT CCTTCTAATT ATATATAACA TAGCCTTAAT TTTATCTGAT ATTTTAGGAA TAAATATATT AAGTTTTATA AGTAAAAGCA CTCTATTTTG A
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Protein sequence | MTKETHSTGG VCISLIMLNT ILSLFLFPYD LAYKILLIAL FFHFSYIGSL FPDIDQRKSS ISQMYPFLSK HIGSKCRHRG FTHSLLCLSL TILTLYIVLN ISNFNIILLI ISIGFIAGYI SHLILDFLTS EGIELFYPWK TNFKIAKIKT GSKTEKIINK VLKIFNFLLI IYNIALILSD ILGINILSFI SKSTLF
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