Gene CPR_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_1028 
Symbol 
ID4206259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp1170213 
End bp1170803 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content23% 
IMG OID642565585 
Productputative metal-dependent hydrolase, membrane-bound 
Protein accessionYP_698351 
Protein GI110803658 
COG category[R] General function prediction only 
COG ID[COG1988] Predicted membrane-bound metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.508363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAG AAACTCATTC AACTGGAGGC GTATGCATTT CTTTAATAAT GCTAAATACA 
ATTTTAAGCC TATTCTTATT TCCATATGAT CTAGCTTATA AAATTTTATT AATAGCATTA
TTTTTTCATT TTTCTTATAT AGGATCTCTA TTTCCTGATA TAGATCAAAG AAAATCTTCA
ATTAGTCAAA TGTATCCTTT TCTTTCAAAG CATATAGGTA GTAAATGTAG ACATCGTGGC
TTTACTCATA GTTTACTATG TCTATCTTTA ACTATATTAA CCTTATATAT TGTTTTAAAT
ATTAGTAACT TCAACATAAT ATTATTAATA ATTTCAATAG GATTTATAGC TGGATATATA
TCCCACTTAA TTTTAGATTT TTTAACTTCA GAAGGAATAG AACTTTTCTA TCCTTGGAAA
ACTAACTTTA AAATAGCTAA AATTAAAACA GGATCAAAAA CTGAAAAGAT AATAAATAAA
GTACTAAAAA TATTTAATTT CCTTCTAATT ATATATAACA TAGCCTTAAT TTTATCTGAT
ATTTTAGGAA TAAATATATT AAGTTTTATA AGTAAAAGCA CTCTATTTTG A
 
Protein sequence
MTKETHSTGG VCISLIMLNT ILSLFLFPYD LAYKILLIAL FFHFSYIGSL FPDIDQRKSS 
ISQMYPFLSK HIGSKCRHRG FTHSLLCLSL TILTLYIVLN ISNFNIILLI ISIGFIAGYI
SHLILDFLTS EGIELFYPWK TNFKIAKIKT GSKTEKIINK VLKIFNFLLI IYNIALILSD
ILGINILSFI SKSTLF