| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0940 |
|---|
| Symbol | |
|---|
| ID | 4206314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | - |
|---|
| Start bp | 1074160 |
|---|
| End bp | 1074441 |
|---|
| Gene Length | 282 bp |
|---|
| Protein Length | 93 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 642565498 |
|---|
| Product | ISCpe4, transposase |
|---|
| Protein accession | YP_698264 |
|---|
| Protein GI | 110803596 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0783043 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAACAAA GAAAACTTTC AAGGAAATAT GAAAGTTTAA AAATAAGAAA TAAAAATATA
AAAGAAGGGA GAGCTACTCG TCAAAATATC CAAAAACAAT TAGTCAAAGT ACAAAAACTT
CATCAGAAAT TAGCTAATAT AAGAACTGAT TATATAAATA AAACAGTATT TTCAATTATA
AAGCAAAAAC CAAGCTATAT AACAATTGAA GATTTAGCAG TATCTAATAA TCTCCATATG
GATATATTTG ACCATATTTT GAGTAGCAGG AACTTAAGAT GA
|
|---|
| Protein sequence | MEQRKLSRKY ESLKIRNKNI KEGRATRQNI QKQLVKVQKL HQKLANIRTD YINKTVFSII
KQKPSYITIE DLAVSNNLHM DIFDHILSSR NLR
|
|---|
| |