| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0878 |
|---|
| Symbol | |
|---|
| ID | 4203994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 1014436 |
|---|
| End bp | 1015605 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642565437 |
|---|
| Product | FliB family protein |
|---|
| Protein accession | YP_698203 |
|---|
| Protein GI | 110801722 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0118087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAA GAGTACCAAA TTATTTTAAT GAGTTTAAAT GTATAGCATC AGAGTGCGAA
GATACTTGTT GTGCTGGATG GGAAATTGTT ATTGATGATG AAACCCATAA GCGTTATGAA
AAGTTGGAGG GTGAATTTGG AGAAATCCTA AGAAGTAAGA TAGTTAAAAG TGATGGGGAA
AATATTTTCC TTTTAAATAA TGGGAACTGT TCCTTCTTAA ATGAAAAAAA GATGTGTGAG
ATTTATATTA ATCTTGGAGA GGATCATCTT TGTTATACTT GTCAGCAATT TCCTAGATAT
ACTGAAGAAT TTTTAGATTT AAAAGAAGTA GGACTATCTT TATCATGTCC AGAGGCTGCA
AGAATTATTT TAAGAAAGGC TGAAAACACT ACTTTTAATT TAAGTGAAGA GGAGAGCTTA
ACTGAGGATG AAGACTACTT TAATGAAGGC ATTGATGCAG AGGTTCTTTT AGAGTTTTTA
GAGTGTAGGA ATATTGTTTT TAATATTATA GAGCGCAATG ATTTAGATTT AGGAACAAAG
GCGGCCTTAG CTCTTGAATT TGTTAAAGAG GTTCAAAACA AGATAGATTT AGGTGATATG
GATGAAATCC CAGAGCTTAT GGAAGAGTAT AGGGATGAAA ATTTCATAAA TACACTTTTA
AATGAACTAG AATGTTTTAA AGGAAAAGAA AGCATAAAAC ATAAAAATCT ATGTGAATAT
TTAAATGTTT ATAAGAGCAT AAAGCATATA AATTCAAATG ACCCTTTAGG GCTAGAGAAA
GCATTAAAGT ATTTTGAAGG AAATGAAGAG TTTTATTTAA GAAAGCATAA GGAATTTAAT
GAGTATTACA AAGAAAATTT ATATAAGTTT AAAAACATAC TTGTATATTT TATATTTAGA
TATTTCATGA AAGCTATTTT TGACTATGAT GTCTCTGCAA AGATAAAGCT AGCCATAATA
AGTACATTAA TGATTAAGGA ACTTGCTGTA GTTAGATTTA TAGAGAATGA CAATGAATTT
ACAGAAGAAG ATATGGTAGA AGTTAGCCGT ATTTACTCTA AAGATATTGA ACATTCAGAT
GAAAATATAG AAAATCTACA AGAGATATTT GAGACAGAAG AAATATTTGA AGTGGATGAA
ATACTACCTA TGTTAATGAA TGACTTCTAA
|
|---|
| Protein sequence | MKVRVPNYFN EFKCIASECE DTCCAGWEIV IDDETHKRYE KLEGEFGEIL RSKIVKSDGE
NIFLLNNGNC SFLNEKKMCE IYINLGEDHL CYTCQQFPRY TEEFLDLKEV GLSLSCPEAA
RIILRKAENT TFNLSEEESL TEDEDYFNEG IDAEVLLEFL ECRNIVFNII ERNDLDLGTK
AALALEFVKE VQNKIDLGDM DEIPELMEEY RDENFINTLL NELECFKGKE SIKHKNLCEY
LNVYKSIKHI NSNDPLGLEK ALKYFEGNEE FYLRKHKEFN EYYKENLYKF KNILVYFIFR
YFMKAIFDYD VSAKIKLAII STLMIKELAV VRFIENDNEF TEEDMVEVSR IYSKDIEHSD
ENIENLQEIF ETEEIFEVDE ILPMLMNDF
|
|---|
| |