Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0844 |
Symbol | |
ID | 4204582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 975396 |
End bp | 976457 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642565403 |
Product | putative carbohydrate diacid regulator |
Protein accession | YP_698169 |
Protein GI | 110802430 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.171192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAATA GGGAGCTAGC TCAAAATATA GTTAATAAAA TGATGGAGGT TATTCCTTAC AATGTAAACA TAATGAATCA TAAGGGAGTA ATAATAGGTA GTGGTGATTC GAGTAGAATA GGAATGATAC ATAATGGGGC TTTAGAAGCC TTGAGGGTAA AAAAGGTGGT TGAAATATCT AAGGATGGGG ATAAGGTGAA ATCTGGAGTT AATTCACCTA TATTTTTTAG AGAAAAAGCT ATAGGGGTTA TTGGTATAAC AGGAAATCCT AAAAATGTTA GGCAATTTAC ACAGCTTGTA ACTGTTACTG CTGAACTTTT AATAAATCAA GAATACACTT TGAATAAACA TATAGTTAAA GAAAGATTGA AAGAGGAATT TATTTATGAA TGGCTGTATT CAAAAGAGGC CTATGACTTA GAATTCATTC AAAGGGGAGC CAATGTAGGT ATTGATATAT CCTTAGATAG AATAATACTT GTATTGGAGT TTCAGAAAGA TCAATTTAAG GAAATAATTA AAAAAATAAA AAGGTTCATA AAAGAAGATG AGTACTATAT AAATTTAACT TCAAATAGAA TAGTTGTAAT TTTGTTAGAT AATAATTTGC TCTTTAAGAG GTTAAAAGAA TTAAAGGAAA TTATGAGTGA CACAAATTCT AAGATAGGAT TAAGCTCAAA ACATAAAATT ATATCAAAAT CTATGAATGA GGCAGTGGAA GCATTAGACA TAGGAAATAA ATTATATAAA AATGAGTTCT TTTATGATTA TAAAAAAGTA AAGGTTTTTA GTTACTTAGA TAATTTTTTA GATGAAGAGG AGTGGAAAAT TATTAAAAAC AAGATATTAG AGGAAAATAT GGGAGAAGAA TTATTAGAAA CCTTTATATC CTATATGAAG CATAGTGGAG AGAGAAAAAA GACCGCAGAA TCCTTACATA TACATAGGAA TACATTAAAT TATAGACTAG AGAGAATTGA GGAAATAACA GGCTTAAGCT TTGATAATTA TTTAGATTTA TTTCAATTTT TGATTGCATA TATAGTAAGT CAATTAAAAT AA
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Protein sequence | MLNRELAQNI VNKMMEVIPY NVNIMNHKGV IIGSGDSSRI GMIHNGALEA LRVKKVVEIS KDGDKVKSGV NSPIFFREKA IGVIGITGNP KNVRQFTQLV TVTAELLINQ EYTLNKHIVK ERLKEEFIYE WLYSKEAYDL EFIQRGANVG IDISLDRIIL VLEFQKDQFK EIIKKIKRFI KEDEYYINLT SNRIVVILLD NNLLFKRLKE LKEIMSDTNS KIGLSSKHKI ISKSMNEAVE ALDIGNKLYK NEFFYDYKKV KVFSYLDNFL DEEEWKIIKN KILEENMGEE LLETFISYMK HSGERKKTAE SLHIHRNTLN YRLERIEEIT GLSFDNYLDL FQFLIAYIVS QLK
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