| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0691 |
|---|
| Symbol | aroC |
|---|
| ID | 4206008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 811723 |
|---|
| End bp | 812796 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642565251 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_698017 |
|---|
| Protein GI | 110803913 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0522046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGGAG TTTGGGGTAA TAAAATAAAA TTATCTATAT TTGGAGAATC TCATGGAGAA
GGAATAGGAA TAGTAATAGA TGGAATAGAA CCTGGAATAA AAATAAATAT GGATAACATA
GAAAAAGATA TGGAAAGAAG AGCACCAGGA AGAAATAGTT TATCAACTCA AAGAAAAGAA
GGGGATAAAC CAGAAATTTT AAGTGGAATA TTTAATGGAA TCACCACAGG GGCTCCTATT
TCAATGATAA TAAGAAATAC AGATAAAAGA TCTAGGGATT ATTCAAAAAT AAAAGATGTA
ATGAGACCAG GCCATGCAGA TTTCCCAGGA TATATAAGAT ATAATGGCTT TAATGATTAT
AGAGGGGGAG GACATTTCTC AGGAAGAATA ACAGCGCCTT TAGTTTTTGC TGGAGCCTTA
GCTAAGGAAA TGCTTAAGGA AAAAGGTATA ACTATTGGTT CTCATATTAA GCAAGTTGGA
AAAGTTAAGG ATTCTTCCTT TGATGCATTA AATTTAAAGA AAGAAGATTT AGAAGAACTT
TTAACTAAAG AACTTCCAGT AATAGATGCA AATAAAATAG AAGAAATTAA GGAAGAGATT
ACTTCATATA GAATGGAAGG AGATTCTATT GGAGGAATTG TTGAGTGTGC CATAGTAGGA
CTAGAGGCTG GTATAGGAAA TCCATTCTTT GATTCTTTAG AAAGTACCAT AGCTCATTTA
GCTTTTTCAG TGCCTGCTGT AAAGGGAATT GAATTTGGAG AAGGTTTTGA CTTTGCAAAT
ATGAAAGGAT CAGAAGCAAA TGACGAATAT TTCATAGAAG ATGAAAAAGT TAAGACATAC
TCTAATAATA ATGGAGGAAT AACTGGTGGA ATATCAAATG GAATGCCAGT TATATTCAGA
GTTGTTATAA AACCTACACC ATCTATTTCT AAAGAACAAA GAACTATAAA TATAAAAAAT
ATGACAGAGG AAGTTCTAAG TGTAAATGGT AGACATGATC CTTGTATAGT TCAAAGAGCC
TTAGTTGTTA TAGAGGCCAT TGCAGCTATT TCTATATTAG AGTTAATAAA ATAA
|
|---|
| Protein sequence | MGGVWGNKIK LSIFGESHGE GIGIVIDGIE PGIKINMDNI EKDMERRAPG RNSLSTQRKE
GDKPEILSGI FNGITTGAPI SMIIRNTDKR SRDYSKIKDV MRPGHADFPG YIRYNGFNDY
RGGGHFSGRI TAPLVFAGAL AKEMLKEKGI TIGSHIKQVG KVKDSSFDAL NLKKEDLEEL
LTKELPVIDA NKIEEIKEEI TSYRMEGDSI GGIVECAIVG LEAGIGNPFF DSLESTIAHL
AFSVPAVKGI EFGEGFDFAN MKGSEANDEY FIEDEKVKTY SNNNGGITGG ISNGMPVIFR
VVIKPTPSIS KEQRTINIKN MTEEVLSVNG RHDPCIVQRA LVVIEAIAAI SILELIK
|
|---|
| |