| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0615 |
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| Symbol | |
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| ID | 4205460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 733978 |
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| End bp | 735399 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565175 |
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| Product | GerABKA family spore germination protein |
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| Protein accession | YP_697942 |
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| Protein GI | 110803085 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAAAC AATTAGATTT TTTAAAAGAC AAATTAAAAG ATAGTTTTGA TGTTAAGTAT
AGGGAGGTGG ATACAGCTTT AGGACCAGCC ACAATTGTTT TTATGGATGT TTTATGTTCT
ACTCAGTTCA TAAGTGAGTA CATAGTAAAA CCATTGACTT TAGTTAAGGA TGGAGTAAAA
GATGAAAATG ATATTATGAC TAAAGTTATA GATATAAACA TAACAAATTG GTCAAAGGAT
AAAAACGATA CATTACTTCA TGTATTATCA GGGGATGTAG TAATAATTTT TGATAAGTTT
GATAAGGTAA TTTATTGCGA AACAAAGGGT TATACAAGAA GAGGTGTTGG GATTCCAATA
ACGGAAGCAG TAATAAAGGG ACCTAGAGAA GGTTTTAATG AGGCTTTTGT TGATAATGTT
ACCTTATTAA GAAGAAGGAT AAAAAATCAT AATCTAAAAT TCGAGCCTTT ATATGTAGGG
GAAGATACTC AAACTGTAGT ATGTATATCT TATATAAAAA ATAAAGCTCC AAAGGAATTA
ATTGATGAAA TCAGAGAAAA AATAAAAAAT TTAGATTATA AGTTTATATT AGATACTAAT
TATATTGAGG CTAAACTTAG AGAAGATAGA ACTTTATTTG ATACTGTTGG ATATACAGAA
AAAGCAGATG AGGTAGCAGC AAAACTATTA GAAGGAAGGG TTGCAATAAT AGTAGATGGA
ACTCCTTTTG TTCTTACAGT ACCTTTCTTT TTTATAGAAA ATTTTCAAAC ACCAGATGAT
TATTATTTAA ATAGGTATTT TACTAGTTTT ACTAGAATTT TAAGATGGAT AGCATTTTTT
ATTGCTATGT TTTTACCAGG AATATATGTT GCATTAGTTA CTCATCATTT TTCGGTTTTG
CCTAGTTTAT TTGTTTTTAG GTTAGCAGTT GCTAGAGCTG GAGTTCCTTT TACAATAGTA
GCAGAGGTGA TAATAATGAT GTTATTATTC CAAATAATAA AAGAAGCAGG TCTAAGATTA
CCTCAGCCTA TAGGAACATC TATGAGTTTA GTATCGGGAC TTATTTTAGG AGAGGCTGCT
GTGGGAGCTG GAATTGCTTC AAGAATTACT ATTGTAGTAG TTGCTTTAAG TGCCGTTTGT
TATTTCTTGA TTCCTAAGCT TTATGGTGCA GTATCGATTT GGAGTATAGG AATAGTAATT
TTAGCTGCCT TATTTGGAAT TCCTGGTGTG ATTTTAATAA GTGTTGTATT ATTATCTCAC
TTAGCACATT TGAGAAGTTG CGAATATCAA TACTTATTTC CATTAGGAAC TTTAAGTAGA
TACAAATTTA AAGATATTAT TATAAGAGGA AGATTAGAAG AAATATCAAA AGATATAGTA
GGTAAGGATG GTAAAAATGA ACCTAAAGAA AGTTATAGCT AG
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| Protein sequence | MEKQLDFLKD KLKDSFDVKY REVDTALGPA TIVFMDVLCS TQFISEYIVK PLTLVKDGVK
DENDIMTKVI DINITNWSKD KNDTLLHVLS GDVVIIFDKF DKVIYCETKG YTRRGVGIPI
TEAVIKGPRE GFNEAFVDNV TLLRRRIKNH NLKFEPLYVG EDTQTVVCIS YIKNKAPKEL
IDEIREKIKN LDYKFILDTN YIEAKLREDR TLFDTVGYTE KADEVAAKLL EGRVAIIVDG
TPFVLTVPFF FIENFQTPDD YYLNRYFTSF TRILRWIAFF IAMFLPGIYV ALVTHHFSVL
PSLFVFRLAV ARAGVPFTIV AEVIIMMLLF QIIKEAGLRL PQPIGTSMSL VSGLILGEAA
VGAGIASRIT IVVVALSAVC YFLIPKLYGA VSIWSIGIVI LAALFGIPGV ILISVVLLSH
LAHLRSCEYQ YLFPLGTLSR YKFKDIIIRG RLEEISKDIV GKDGKNEPKE SYS
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