Gene CPR_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0564 
Symbol 
ID4205651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand+ 
Start bp670657 
End bp671187 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content27% 
IMG OID642565124 
Productsignal peptidase I 
Protein accessionYP_697891 
Protein GI110802539 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.782517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCTA GTAATACAAA GAAGAAATCA TTCTTTTTAG ATTGGATTAT ACCAATTTTA 
GCAGCTTTAA TATTAGCAGC TTTGATTCAT AAATTTTTAT TGTTTAAGAT AAAAGTTCCT 
ACAGGATCAA TGATGCCTAC AGTAGAGATT GGTGATCAAT TATTTGTTAC TAAAATATAT 
AATCCTAATA ATATCAAAAG AGGAGATATA GTAGTTTTTA ATTCTGATGA ATTAAAAGAA 
CCGCTTTTAA AACGTGTTAT TGGATTACCA GGTGAGCATG TTGAAATAAA AAGTGATGGA 
TCAGTTTATA TAAATGGAAA TAAACTTGAA GAAGATTATG TAAAATATCA AGGTGGAAAA 
ACTGATATGT CTTTTGATGT TCCAAGTGGA AAGTTTTTAA TGTTAGGTGA CAATAGAAAT 
AATAGTGATG ATGCTAGATA TTGGAATAAT CCTTATATAG ATGGAAAAGA CATAGAAGCA 
AAGGCACAGT TAACAGTATA TCCTTTTGAT AGAATAGGAT TTGTAAAATA A
 
Protein sequence
MSSSNTKKKS FFLDWIIPIL AALILAALIH KFLLFKIKVP TGSMMPTVEI GDQLFVTKIY 
NPNNIKRGDI VVFNSDELKE PLLKRVIGLP GEHVEIKSDG SVYINGNKLE EDYVKYQGGK 
TDMSFDVPSG KFLMLGDNRN NSDDARYWNN PYIDGKDIEA KAQLTVYPFD RIGFVK