Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0561 |
Symbol | |
ID | 4204658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 667786 |
End bp | 668325 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642565121 |
Product | NUDIX family hydrolase |
Protein accession | YP_697888 |
Protein GI | 110802349 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTTA AATATTGTCC ATTATGTGGT GAAAAATTAG AGTTAAAAAA TAGCTGGGAT GAGGGTATGA TACCTTATTG CAGTAAGCAT GATATGATGT TTTTTGATTT ACCTAAGCCT TGTATTGTTG TTGCTGTAAT AAAAGGTGAT GAGATAATTC TTTTAAAGCA AAGTTATATA TATGAAAATT CTAAAGTCCT TATATCTGGA TATGTAGGTG TAGATGAATG TGCAGAGGAA ACTGTTTATA GAGAGGTAAA GGAAGAAACA GGAATAACAG TTAAAGATAT AAAATATTTA GGTAGTGATT TTGTACAAGG AAAAGAGTTA CTTATGCTAA CTTATTTAGC ATATTATGAA TCAGGAGAGA TAGAGAAATC AACTGAGGTA GAGGGAGCTG CTTGGTACAA TATAGAGGAT GCTCTTTGTG AATTAAATGA GGATAGCATA GGAAAAAGAG TGGTAAAAAA AGTTTTAAAA GAAATAGGTT ATGAAGGTAC TAATGCATTT AGATGTGAAG GAAGTAATTG TAATGTATAA
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Protein sequence | MKFKYCPLCG EKLELKNSWD EGMIPYCSKH DMMFFDLPKP CIVVAVIKGD EIILLKQSYI YENSKVLISG YVGVDECAEE TVYREVKEET GITVKDIKYL GSDFVQGKEL LMLTYLAYYE SGEIEKSTEV EGAAWYNIED ALCELNEDSI GKRVVKKVLK EIGYEGTNAF RCEGSNCNV
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