Gene CPR_0561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPR_0561 
Symbol 
ID4204658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens SM101 
KingdomBacteria 
Replicon accessionNC_008262 
Strand
Start bp667786 
End bp668325 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content30% 
IMG OID642565121 
ProductNUDIX family hydrolase 
Protein accessionYP_697888 
Protein GI110802349 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA AATATTGTCC ATTATGTGGT GAAAAATTAG AGTTAAAAAA TAGCTGGGAT 
GAGGGTATGA TACCTTATTG CAGTAAGCAT GATATGATGT TTTTTGATTT ACCTAAGCCT
TGTATTGTTG TTGCTGTAAT AAAAGGTGAT GAGATAATTC TTTTAAAGCA AAGTTATATA
TATGAAAATT CTAAAGTCCT TATATCTGGA TATGTAGGTG TAGATGAATG TGCAGAGGAA
ACTGTTTATA GAGAGGTAAA GGAAGAAACA GGAATAACAG TTAAAGATAT AAAATATTTA
GGTAGTGATT TTGTACAAGG AAAAGAGTTA CTTATGCTAA CTTATTTAGC ATATTATGAA
TCAGGAGAGA TAGAGAAATC AACTGAGGTA GAGGGAGCTG CTTGGTACAA TATAGAGGAT
GCTCTTTGTG AATTAAATGA GGATAGCATA GGAAAAAGAG TGGTAAAAAA AGTTTTAAAA
GAAATAGGTT ATGAAGGTAC TAATGCATTT AGATGTGAAG GAAGTAATTG TAATGTATAA
 
Protein sequence
MKFKYCPLCG EKLELKNSWD EGMIPYCSKH DMMFFDLPKP CIVVAVIKGD EIILLKQSYI 
YENSKVLISG YVGVDECAEE TVYREVKEET GITVKDIKYL GSDFVQGKEL LMLTYLAYYE
SGEIEKSTEV EGAAWYNIED ALCELNEDSI GKRVVKKVLK EIGYEGTNAF RCEGSNCNV