Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0531 |
Symbol | ribE |
ID | 4204105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 630319 |
End bp | 630972 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642565088 |
Product | riboflavin synthase subunit alpha |
Protein accession | YP_697859 |
Protein GI | 110801688 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0307] Riboflavin synthase alpha chain |
TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.990747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACTG GTATTGTGGA AGAAATAGGA GAAGTTATAA GCATAGATAA AAATGAAAAA TCATCTTTAC TGAAAATAAG AGCTAATAAG GTCTTAGAGG ACACCAAGAT AGGTGATAGT ATATCAACAA ATGGAGTTTG CTTAACTATA ACAACTAAGG GAAAAGATTA TTTTACTGCA TATGTTATGG GAGAAACCTT AAGAAAAAGT AATCTTGGAA ACTTAAAAAA ATCAAGTAAG GTGAATTTAG AAAGAGCCAT GAGTATTAAT GGCAGATTTA ATGGACATAT AGTAACTGGC CATATTGATT CCACTGGAGA AATAATTTCT TTTAAAGATG AAGGGGAAGC AATATGGGTA GAAATTAAAG TTTCATATGA ATTAAGCAAA TATATAGTTT ATAAAGGCTC TATAGCCATT GATGGAATAA GTTTAACTAT TGCAGAGGTT AAAGGGGAAA GTTTTAAAGT TTCAGTAATT CCTCATAGCC AAGAAGAGAC AACATTAACT AAAAGAAAAA TTGGTGATTT AGTAAATATA GAATGTGATC CTATTGGTAA GTATGTTGAA AAGCTTTTAG GCTTTAAAAA AGATAGTAGA AAGAAAAAGT CTGTTTTAAC AGAAGAGTTT TTAACTATTA ATGGGTTTAT TTAA
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Protein sequence | MFTGIVEEIG EVISIDKNEK SSLLKIRANK VLEDTKIGDS ISTNGVCLTI TTKGKDYFTA YVMGETLRKS NLGNLKKSSK VNLERAMSIN GRFNGHIVTG HIDSTGEIIS FKDEGEAIWV EIKVSYELSK YIVYKGSIAI DGISLTIAEV KGESFKVSVI PHSQEETTLT KRKIGDLVNI ECDPIGKYVE KLLGFKKDSR KKKSVLTEEF LTINGFI
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