Gene CPR_0488 details

Gene Information

• Locus tag: CPR_0488
• ID: 4204339
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens SM101
• Kingdom: Bacteria
• Replicon accession: NC_008262
• Strand: +
• Start bp: 580574
• End bp: 581380
• Gene Length: 807 bp
• Protein Length: 268 aa
• Translation table: 11
• GC content: 26%
• IMG OID: 642565045
• Product: hypothetical protein
• Protein accession: YP_697816
• Protein GI: 110801665

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.58008
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAATG GAAGAAGAGT TAAAAATCCT AAAAAAAATT CTTCTAGTAG AAACAAATCT 
AAGGTTTTAG ATATTTCAAT AATAATTTTA ATAATAGCAC TAGTATTAGT AATAGCTACT 
GGAACCATAA AGGATAAGAA GACTTTAGCT AAAAATATGG AAATTTATAG CTCAAATTCA 
AGTAATAACT CTGAAGATAA TAAAAAGCAA GAGACCACAT CAAATCCTTA TGAAAAAATA 
AAAAAAGGTG AAGAAGTAAA TATTTTAGTT TTAGGTAATG GTGTAGGACT TAGTGAAGGA 
AAAACAGATG AAAGTGGTAA TTGGACAAGT AGTCTTTCTA AATGGTTAGA AGAAACATAT 
AAATCAAAGG CGAATATAAC AAATTTATCA CAAGATAAAG CTACAGTTAA AGTAGGTTTA 
GAGGAATTAG ATAAAAATAA AGATAGCTTT GATTTAGCTT ACATAATATT TGGTGAAAAT 
GATCAAAAAG CACTTAAACC TAATGAATTC AAAGAAGATT ATGAAAAAAT AATTAAGAAT 
TTAAAGGAAA GAAATAAAAA TATTTCTATA GTTCCTATAA TAGAGAATTC TATTAGAAAG 
AAAAATGAAT ACACAAATAT AATTGAGGAG ATTGGAAAAG CTAATAATCT AAAGGTTTTA 
GATATGGCTA CAGTATTTAT AAAAGATCCA GCCCCATATG CTAAATTAAC AACTAAGGGT 
GGAATATATC CAAATAACGT AGGGTATAGC TTATATTTTT CTAACATAAA ATCTTTAATA 
GAAGCTAATA TAGCAGCTTT AAATTAA 

 

Protein sequence

MKNGRRVKNP KKNSSSRNKS KVLDISIIIL IIALVLVIAT GTIKDKKTLA KNMEIYSSNS 
SNNSEDNKKQ ETTSNPYEKI KKGEEVNILV LGNGVGLSEG KTDESGNWTS SLSKWLEETY 
KSKANITNLS QDKATVKVGL EELDKNKDSF DLAYIIFGEN DQKALKPNEF KEDYEKIIKN 
LKERNKNISI VPIIENSIRK KNEYTNIIEE IGKANNLKVL DMATVFIKDP APYAKLTTKG 
GIYPNNVGYS LYFSNIKSLI EANIAALN