Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0358 |
Symbol | |
ID | 4204075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 436049 |
End bp | 436771 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642564915 |
Product | IS1470, transposase |
Protein accession | YP_697687 |
Protein GI | 110801483 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2826] Transposase and inactivated derivatives, IS30 family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0540717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATTTTG CTTATACTGG TGAAGCTCTG CATTCATCTA GATTTAGTCC TTCTCAAATT ATTTCAATAA AAACGCTTTA TAACTATGTA GACCTTGGCT TATTACCTAT AAAAAATATA GATTTACCAG CTAAACTTCA TAGAAATAAA AAGTCTACTA GAGTAAGAAA TGATAAGAAA AAGCTTGGCA CTAGCATTTC AGATCGTCCT AATTCTATTG AAAACCGTGA AGAATTTGGA CATTGGGAAA TATACTGTAT ATTAGGTGAA AAATCTAATA AAGATAAGGT TTTGCTAACA CTTGTCGAGC GTAAAACTAG GTATGCTATA ATATTTGAAA TACCTTCCCA TTCAGCAATA TCTGTTACAA AGGCTCTTGA TAAGATTAAA GAATTTTTTG GCAGTAAATT TAGTGAAGTA TTTAAGAGTA TAACTGCTGA TAATGGCTCT GAATTTGCTG ATTTATCAGA ATTTGAACTA AAAACAAAAA CTAAACTGTA TTTCACTCAC CCATATTCTT CATTTGAAAA AGGTACAAAT GAGCGTCATA ATGGACTGAT TAGGCGTTTT ATCCCGAAAG GAAAACGAAT TTCAGATTAC TCACTTGAAA CTATATCTTT CATAGAAAAT TGGATGAATA CTCTTCCTAG AAAGCTTCTT AATTACAAGA CTCCAGAAGA ATTATTTGAA ATACACTTAG ATGAAATATA TTCATTATAT TAA
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Protein sequence | MYFAYTGEAL HSSRFSPSQI ISIKTLYNYV DLGLLPIKNI DLPAKLHRNK KSTRVRNDKK KLGTSISDRP NSIENREEFG HWEIYCILGE KSNKDKVLLT LVERKTRYAI IFEIPSHSAI SVTKALDKIK EFFGSKFSEV FKSITADNGS EFADLSEFEL KTKTKLYFTH PYSSFEKGTN ERHNGLIRRF IPKGKRISDY SLETISFIEN WMNTLPRKLL NYKTPEELFE IHLDEIYSLY
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