| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0353 |
|---|
| Symbol | |
|---|
| ID | 4206536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 426758 |
|---|
| End bp | 427765 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 642564910 |
|---|
| Product | prophage ps3 protein 01, putative |
|---|
| Protein accession | YP_697682 |
|---|
| Protein GI | 110801844 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3600] Uncharacterized phage-associated protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000627364 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAGA AAATTACATT TTGTGAGTAT TGTAGAGATG ATGTTTCTTA TATTGAAAAA
GAAGAATATA TGATATCGAA GTTAAAAGGT GAAACTTATA AATATTATGG AAAAAAAGCT
ATTTGTAAAG AGTGCAACAA TGAAGTATTT GTGAGTGAAA TAAATGATTA TAATTTGAAT
CAATTATATA ATGAGTTTAG AAAACAAAAT AATATTATTT CGTTAGAGCA TATATTAGAA
ATACCTAATA AATATAAGAT TGGGAAAAGA CCTTTATCCT TATTATTAGG ATGGGGAGAG
CAGACTTTTA GTCGTTATTG TGATGGAGAT ATGCCAACTA AACAATATTC AGCTATATTA
GAAAAGATAT ATAAGGAACC TAGTTATTAT TTAGAATTAT TAGAAGAAAA TAAAGATAGA
TTAAAACCCA TAGCATATGA TAAGAGCAAA GAAGCAACGG AGATATTAAT AAGTGAACAA
CAAAATTTAG AGAATAGTAA AATTGAATCT GTTGTTAATT ATTTATTATG CGAATGTGAA
GACATTACTC CTCTTGCATT ACAAAAAATA CTATATTATA TTCAGGGATT TTATTATGCA
TTTTTGAAAA AATTTATGTT TGAAGAGAAT TGTGAAGCAT GGGTGCATGG TCCTGTTTTT
AGAAATATAT ATTATAAATA CAAAGAATAC AGATTTGATC CAATTAAAGA AGAGTCTATT
AACAAACAAT TTGATTTATC AATATCAGAG AAAGTTATTA TAGATAGCGT TATAAAAAAT
TTAGGGTGTT ATAGTGGTAA GGTATTAGAG GCATTTACAC ATGCAGAGAT GCCTTGGATA
GAAACTAGAG GTGATTTATC AGCTTCAATA GGTACTGATA GAATAATTGA TAAAAGATTA
ATAGCGGATT ACTTTAATTC TGTTAAAGAA AAAAATAATA TGATAAATCC CTCTGATATT
GGTGATTATA GTAAGAAAAT GTTTGAACAA ATTTTAGATA ATAATTAG
|
|---|
| Protein sequence | MSEKITFCEY CRDDVSYIEK EEYMISKLKG ETYKYYGKKA ICKECNNEVF VSEINDYNLN
QLYNEFRKQN NIISLEHILE IPNKYKIGKR PLSLLLGWGE QTFSRYCDGD MPTKQYSAIL
EKIYKEPSYY LELLEENKDR LKPIAYDKSK EATEILISEQ QNLENSKIES VVNYLLCECE
DITPLALQKI LYYIQGFYYA FLKKFMFEEN CEAWVHGPVF RNIYYKYKEY RFDPIKEESI
NKQFDLSISE KVIIDSVIKN LGCYSGKVLE AFTHAEMPWI ETRGDLSASI GTDRIIDKRL
IADYFNSVKE KNNMINPSDI GDYSKKMFEQ ILDNN
|
|---|
| |