| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0287 |
|---|
| Symbol | |
|---|
| ID | 4206101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 344609 |
|---|
| End bp | 345433 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642564844 |
|---|
| Product | transketolase |
|---|
| Protein accession | YP_697616 |
|---|
| Protein GI | 110803812 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3959] Transketolase, N-terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.132447 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA AGATACAAGA GTTAAAAAGC ATGTCTAAGG TTATAAGAAA AGACATAGTA
ACTATGCTTA CTGAGTCAGC ATCAGGACAT CCAGGTGGAT CTTTATCAAT CGCAGATATA
GTAACAATTT TATACTTCGA TGAAATGAAT ATTGATCCAA AAAATCCAAA GGATCCAAAT
AGAGATAGAT TCGTTTTATC AAAAGGACAT GCAGCACCAG TATTATATAG TGCTTTAGCA
AGAAGAGGAT ATTTTGATCC AGCAGAATTA ACAACATTAA GAAAATTTGG TTCAAACCTT
CAAGGACATC CAAATATGAA CGACTTACCA GGAATAGATA TGTCAACTGG TTCTTTAGGT
CAAGGTATAT CAGCGGCTGT AGGTATGGCA TTAGCTGGTA AATTAGACAA CAAAGATTAC
AGAGTATTTA CTATTTTAGG AGATGGAGAG TTAGAAGAAG GTCAAGTTTG GGAAGCAGCT
ATGTCAGCAG CTCACTACAG ACTAGACAAC TTAACTGCTT TCGTTGACTT CAATGGATTA
CAAATAGATG GTGACATTAA AGAAGTAATG AATCCATGTC CAATAGACAA GAAATTCGAA
GCTTTCGGAT GGAATGTAAT AGTTATAAAC GGACATGATT ATGAAGAAAT AATAAATGCT
ATACAAAAAG CTAAGAGTAC AAAAGGAGCA CCAACTTGCA TAGTTTGTAA CACAGTAAAA
GGTAAAGGTG TTTCATTTAT GGAAAATGAA GCAGCTTGGC ATGGAACAGC TCCAACTAAA
GAGCAATGTG AGCAAGCTAT AAAAGAGATC GGAGGGGACA ACTAA
|
|---|
| Protein sequence | MSNKIQELKS MSKVIRKDIV TMLTESASGH PGGSLSIADI VTILYFDEMN IDPKNPKDPN
RDRFVLSKGH AAPVLYSALA RRGYFDPAEL TTLRKFGSNL QGHPNMNDLP GIDMSTGSLG
QGISAAVGMA LAGKLDNKDY RVFTILGDGE LEEGQVWEAA MSAAHYRLDN LTAFVDFNGL
QIDGDIKEVM NPCPIDKKFE AFGWNVIVIN GHDYEEIINA IQKAKSTKGA PTCIVCNTVK
GKGVSFMENE AAWHGTAPTK EQCEQAIKEI GGDN
|
|---|
| |