| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0257 |
|---|
| Symbol | |
|---|
| ID | 4204428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens SM101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008262 |
|---|
| Strand | + |
|---|
| Start bp | 316408 |
|---|
| End bp | 317643 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642564815 |
|---|
| Product | teichuronic acid biosynthesis glycosyl transferase, putative |
|---|
| Protein accession | YP_697588 |
|---|
| Protein GI | 110802373 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0141248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTAA AAAGAAGTGT AAAAAATTTA TTAAGACCTA TATTGAAGCC AATGTTACTT
AAATATAGAG AAAAAGGACA TGAAGATCAA AAACAAGTAT TTTTTGATGA AATAACTGGT
GCAATAAAGA ATGGAAATTA TGATGCTATA GTTATATTTG ATGTTTACTT TGGATTTGAG
GTTAAAATGT TCCAAAGACC TCAACATATA GCTTTAAACC TAGCTAAGGA AAATGTTTTA
TATTTTTATA AAGCATCACC TTATGTTGAT AAGGATATTA AAACTTACAA GAAGATGGAA
GAAAATCTTT ATCTAGTTAA CACAGATCTA TATTGGTTAC AAGAGTGTTT AATAGATATA
GTATCTCAAA GTGGAGTTCC TGCTTTTGGT CAAATATATT CAACTTCATT TGTTGAATAT
GACAGTTGGT TAAAGAAATT TACAGATAGA AACTTTAAAA TAATATATGA ATATGTTGAT
GATTTATCAG ATGATATTGC TGGATTTAAA ATATCAGATG AAATTAAAGC AAGTCATAAG
AGAATGCTTG AAGATACAGA GAAAGTTTAT GTGGTAACTA CTGCAGATAA GCTTTATCAA
GAAGCTAAAG AGCTAAGAGG AGAAAATAAA TTAGCTCTTG TAACTAATGG AGTTCAATAT
GAGCATTTTG CTAATATTGA TTGCAAAAAG ATTCCTGATA AGATGAAAAA TATTGTTAAT
AGTAAGAAAA AGATAATAGG ATATTTTGGA GCCTTAGCTA GTTGGTTTGA TTATGATTTA
ATTAAAGAGC TTGCAGAAGA ATTTAAGGAT GATTATGAAA TAGTTCTTAT AGGAATAGAT
TATGATCAAT CTTTAGGAAA GAGCGGAATA TTAAAATTAG ACAATGTTCA TTATTTAGGA
ACTGTTAACT ATAATGAACT TCCAACGTAT TCTAAGTTCT TTAATGTTTC CATAATTCCT
TTTATGGTAA ATGAAATAAC AGAAGCTACT TCACCAGTAA AATTATTTGA ATATATGGCT
TTAGGTAAGC CTATAGTTAC AACAGCTTTA CCAGAGTGTA GAAAATATGA ATCACCTTTA
GTAAGTGATT CACATGAAGA TTTCATAAAT AACATTAAGA AAGCTGCTGA GTTAGAGAAT
TCTAAGGAAT ATATAGAATT ACTTAGAAAA GAAGGCAATC AAAATACTTG GAGACAAAAG
GCAAAGGACA TTAAGGAGCT TATACTAAAC TCTTAA
|
|---|
| Protein sequence | MSLKRSVKNL LRPILKPMLL KYREKGHEDQ KQVFFDEITG AIKNGNYDAI VIFDVYFGFE
VKMFQRPQHI ALNLAKENVL YFYKASPYVD KDIKTYKKME ENLYLVNTDL YWLQECLIDI
VSQSGVPAFG QIYSTSFVEY DSWLKKFTDR NFKIIYEYVD DLSDDIAGFK ISDEIKASHK
RMLEDTEKVY VVTTADKLYQ EAKELRGENK LALVTNGVQY EHFANIDCKK IPDKMKNIVN
SKKKIIGYFG ALASWFDYDL IKELAEEFKD DYEIVLIGID YDQSLGKSGI LKLDNVHYLG
TVNYNELPTY SKFFNVSIIP FMVNEITEAT SPVKLFEYMA LGKPIVTTAL PECRKYESPL
VSDSHEDFIN NIKKAAELEN SKEYIELLRK EGNQNTWRQK AKDIKELILN S
|
|---|
| |