Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0129 |
Symbol | |
ID | 4206000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 160288 |
End bp | 161214 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642564684 |
Product | CAAX amino terminal protease family protein |
Protein accession | YP_697466 |
Protein GI | 110803905 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCTA TATTTAAAGT AAGTTTATAT TTTCTTATAG TATTAGTTTT ATCTATAGTA GGGCCAATGT TTGTGACGTC AGTGCTATAT AAGATAGGAT TAGTGCCACC ATTAGTTTTA ATGGTAATAC ACATAATATT TTTCATAGTG CCAGCAATAA TATATATAAT TGTAACTAAG AGTAATTATA AAAAGGTTTT TAGCTTTAAA AAACCAAAGG GAAAAGATGT ATTTTTTTCT ATATTAATAG CAGCTTTAGC GCTTCCAATA ATGACATTCT TCTCATATAC ATCAAGTTTC TTTTATACAA ATGATGTAGC CTTAGTTTTA GATCAAATGA GAGTATATCC ATTATGGTTA ATGATTTTAG TTGTAGGGGT AACACCTGCC ATAACAGAAG AAATAACTAT AAGAGGTATT GCCTTATCAG GATTTGAATT TAAAAGTAAA AATGTAGCTG CAATAATGAC AGGAATAATG TTTGGTATTC TTCATTTAAA TGCACATCAA TTTTTATATG CTACAGCCAT GGGAATAATT TTAGCTTATG TAGTAAGAGC TACAGGAAGT ATATTTTTAT CAATGTTAAT CCATTTTCTA ATTAATTCAT GGAATTTAAT TCAGCAAAGA ATAGTTAGTC AAGGAATAAC TACAGAGGAT TTAGTACATT CTATGGACTC TATAAAAAAT ATTCCAATGG AATTAAAAAT AGGGGTGTTT TTCTACTATT TAATTTTTGC AATAGTAGCT GCATTTTTAA TTAGTTACCT AATAAGAAAG ATGGAAAAGA GAAACTTCGA TATAACTTTA GATGAGTTAG ATGTTGCAAC AAGAGTTTCT TATAAAGAAG AGAGAGTAAT AAATGTACCA TTTATAATAA GTGTAATAGT ATTTATTGTA TATACATTTT TTATAATGAA AGGGTAA
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Protein sequence | MKPIFKVSLY FLIVLVLSIV GPMFVTSVLY KIGLVPPLVL MVIHIIFFIV PAIIYIIVTK SNYKKVFSFK KPKGKDVFFS ILIAALALPI MTFFSYTSSF FYTNDVALVL DQMRVYPLWL MILVVGVTPA ITEEITIRGI ALSGFEFKSK NVAAIMTGIM FGILHLNAHQ FLYATAMGII LAYVVRATGS IFLSMLIHFL INSWNLIQQR IVSQGITTED LVHSMDSIKN IPMELKIGVF FYYLIFAIVA AFLISYLIRK MEKRNFDITL DELDVATRVS YKEERVINVP FIISVIVFIV YTFFIMKG
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