| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0120 |
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| Symbol | |
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| ID | 4204162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 150403 |
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| End bp | 152382 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642564675 |
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| Product | permease domain-containing protein |
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| Protein accession | YP_697457 |
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| Protein GI | 110803520 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTTA AGTTAGCCTT TAAAAATATA AAAAAGAGTT ATAAAAATTA TGTAATATAT
TTTTTAACCT TGATATTTGG AATATGTATA TTTTATACTT TTAACTCCAT AGAGTCACAA
AGTGTAATGA TGGAACTTAA TGAGCAAAAG CAGTCAGCCT TTATGATGGC AGAACAATTA
ATAGGATATT TCTCTGTGTT TATAGCTTTT GTCTTAGGAT TTTTAATAGT TTATGCAAAT
AATTATCTAA TAAAAAGAAG AAAAAAAGAG TTTGGAATTT ATATGACTCT TGGAATGGAA
AATGGAAGCT TATCAAAAAT GATATTCTTA GAAACTCTAT TTATAGGGGC TATATCTTTA
GGAATAGGAG TGGTACTAGG AATAATGTTA TCTCAAGCAC TTTCAGTACT TACAGCCTAT
ATGTTCCAGG TAGACCTTAC AAAGTTTCAA TTTGTGTTTT CTCCACTTGG ATTTAAGAGA
ACAGTACTTT GTTTTTCAAT AATATATCTT GTTGTATTAA TTTTTAACTT TATAAGTGTT
AGAAAGATTA AATTAATAGA TCTATTAACA GCTTCAAAGA GAAATGAAAA GCCTACTATT
AAAAATCTTT GGGTATCAGT AATATTATTT TTAGTTAGTG TGGGAATCTT AGGGATAGCT
TATTATAAGG TCATACATGA TGGAATTGCC TTTGCTAGTT TTAATGCTCT TGGATTACCA
ATTTTACTAG GATGTATTGG AACATTTATA TTCTTTTATT CTTTAACAGG ATTCTTTTTA
AAGGTTATTC AAGGAAATAA AAAGTTCTAT TTAAGAGATT TAAACATGTT TGTTATGAAG
CAAATAAGCA GTAAAATAAA CACAACCTTT GTATCCTTAT CATTTATATG CTTAATGTTA
TTTTTAGCTA TTTGTACATT CTCAGGAGGG TTAGGAATAA ATAGAGCTAT AAATGCTGAC
TTAAAGGATT TAACTAAATT TGATGTTACC TTTTGGAGTA ATAGTGGTGA AAATATAGAA
AGCTTATTAA AGGAAAAAAA TATTGATATA TCTAATATAG CTAAAGAAGA TTCAAACATG
GTTATGTATG ATAGTGAAGT TAAATACAGT GATTTCTTAT CAAAAGAGGG AATGACTGCT
ATGAAGAACT ATTTTCCAGT GGCTAATGAT AATGATACAT TAGTAATTGG TGAAAATGGA
TACAATAATA CATTAAAACT TCTTGGGAAA GAGCCTGTTA ATTTAAAGGA AAATCAATAC
TTAGCAGTTG GAAATATTGA TGAAATGAAA AAGTGGGTTA ATGAGAGCTT AGAAAGTGGA
AAGAAGATAA ATATTTCAGG AAAAACCTTA GAGCCTGCAA ATAAAAAGTA TGAAAATATT
AATCTATATA ATTTTACTAT GAAAGGTGAT ATTTTAATTT TGGTTGTTAA GGATTTTCTC
CTTGAAGGAT TAAAACCTGT GTCTAGTAGA TTTAATATGA TGCTAAAGGA TAACTCTAAT
ACAAAGGAAG AATTAGAGAA TGTAAGAGAT AAGTTAGTAG AAAGCCAAGT TTATTCAATA
ACAAAAAAAG AAATATATGA TAACGCAGCT GGCCTAGGTG CAACAATGGC TTACTTGGGA
ATATACCTAG GTTTAATATT TATAATAACA TCAGCAGTTG TACTTGCTAT TCAGCAGCTT
ACAGAATCTA CTGATAATGT AGAAAGATAT AGATTACTAA AAGAAATAGG TGTGGATCAA
AAGATGATAA ATAAAGCTAT ATTCACTCAA GTAGGAGTAT ATTTTATGCT TCCTTTATCC
CTTGCTATAG TACATTCAAT TGTTGGTTTA AAGATATCTT CTACCATAGT AGGGGTATTT
GGAAATGCTA GCATAATACC AAATATAATT ATAACAGCAA TAATTTTTGT TATAATTTAT
GGAGGGTACT TCTTGGCAAC ATATTTAGGG GCTAAGAAAA ACATAAATGA AAGATCATAG
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| Protein sequence | MYFKLAFKNI KKSYKNYVIY FLTLIFGICI FYTFNSIESQ SVMMELNEQK QSAFMMAEQL
IGYFSVFIAF VLGFLIVYAN NYLIKRRKKE FGIYMTLGME NGSLSKMIFL ETLFIGAISL
GIGVVLGIML SQALSVLTAY MFQVDLTKFQ FVFSPLGFKR TVLCFSIIYL VVLIFNFISV
RKIKLIDLLT ASKRNEKPTI KNLWVSVILF LVSVGILGIA YYKVIHDGIA FASFNALGLP
ILLGCIGTFI FFYSLTGFFL KVIQGNKKFY LRDLNMFVMK QISSKINTTF VSLSFICLML
FLAICTFSGG LGINRAINAD LKDLTKFDVT FWSNSGENIE SLLKEKNIDI SNIAKEDSNM
VMYDSEVKYS DFLSKEGMTA MKNYFPVAND NDTLVIGENG YNNTLKLLGK EPVNLKENQY
LAVGNIDEMK KWVNESLESG KKINISGKTL EPANKKYENI NLYNFTMKGD ILILVVKDFL
LEGLKPVSSR FNMMLKDNSN TKEELENVRD KLVESQVYSI TKKEIYDNAA GLGATMAYLG
IYLGLIFIIT SAVVLAIQQL TESTDNVERY RLLKEIGVDQ KMINKAIFTQ VGVYFMLPLS
LAIVHSIVGL KISSTIVGVF GNASIIPNII ITAIIFVIIY GGYFLATYLG AKKNINERS
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