Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0082 |
Symbol | glgA |
ID | 4206278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 95591 |
End bp | 97024 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 642564631 |
Product | glycogen synthase |
Protein accession | YP_697421 |
Protein GI | 110803638 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0297] Glycogen synthase |
TIGRFAM ID | [TIGR02095] glycogen/starch synthases, ADP-glucose type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGATAAAAG TTTTATTTGC AACATCAGAG GCAAATCCAT TTATAAAAAC TGGGGGACTA GGTGATGTAA TGGGAGCATT ACCTAAGGAG CTTAAAAGAA AGGGAATAGA TGCTAGAGTA ATTTTGCCTA AATATAGTGC TATAAAAGGA GAACTTTTAG ATAAGCTTAA TTTTAAAAAA TGGTTTATGG TTCCTGTTGG TTGGAGAAAT CAATATTGTG GAGTATATCA GTGTGAATAT GATGAAGTTA TATATTATTT ATTAGATAGT GAGTTTTATT TCCACAGAAA TGGTTTATAT GGAGAAGGTG ATGATGGAGA GAGATTTGCT TTCTTTGATA GAGCTGTTTT AGAAACTTTA AAAGAGATTG ATTGGTGTCC AGATATTATT CATTGTAATG ATTGGCAAAC AGGAATGATA CCAGTACTTC ATAAATTAGA GTATTCTAAA GATCCTTTTT ATAAGGATAT TAAGACTGTG ACTTCAATTC ATAATCTTTT ATTCCAAGGT AATTTTTCAG CAGATATTTT ACCTGAACTT TTTGGTTATG ATTATGAACC AGTGAGAAAT GGAAGTTTAG AATTTTATGG TGGAATGAGT TTTATGAAGG GAGCTATAAA TTATAGCGAT AGGATTTTAA CTGTAAGTGA AACTTATGCC AAGGAAATTC AAACTCCTTA CTTTGGAGAA AATTTAGATG GCTTATTAAG AGAAAGAGGA TATGCACTAA AAGGAATAGT AAATGGTATA GATTATTATG AATTTAATCC TAGTAAGGAT AGTTTAATAG CTAAAAATTT CTCAGTGGAA ACTATAGAAG ATAAAGTGTT AAATAAATTA GCTCTTCAAA AGGAATTAGG GTTACCTATA AATCAAGATA TACCTATGAT AAGCATTGTA TCTAGGCTTA CAAATCAAAA GGGATGCGAC TTAATAGTTA ATATAGCACA TAGATTGCTT CAAAGAAATG TGCAATTAGT TATATTAGGA ACAGGTGATT ATAATTATGA AAATCATTTT AAGGGATTGC AAGAGCTTTA TCCAACTAAG GTATCTGCCA ATATAAAGTT TGATAATGGA TTAGCTCATA GAATATATGC ATCTTCAGAT ATTTTCTTAA TGCCATCATT ATTTGAGCCT TGTGGACTAG GACAACTTAT AGCATTAAGA TATGGAGCTA TTCCAATAGT TAGAGAAACA GGTGGATTAA AGGATACAAT TCATTCATAT AATAAGTATA CTGGAATAGG AAATGGCTTT AGTTTCACAA ATTATAATAA TAATGATTTA ATGCATGTTA TTGAATTAGC TTTAGAAACA TATGATGATA AAGAGGTTTG GAGATCATTA ATTATACAAG CTATGGATTC TGATAATAGT TGGAATACTT CAGCAGAAAA ATATAAGGAA TTATATGAAG AATTAATAAA GTAG
|
Protein sequence | MIKVLFATSE ANPFIKTGGL GDVMGALPKE LKRKGIDARV ILPKYSAIKG ELLDKLNFKK WFMVPVGWRN QYCGVYQCEY DEVIYYLLDS EFYFHRNGLY GEGDDGERFA FFDRAVLETL KEIDWCPDII HCNDWQTGMI PVLHKLEYSK DPFYKDIKTV TSIHNLLFQG NFSADILPEL FGYDYEPVRN GSLEFYGGMS FMKGAINYSD RILTVSETYA KEIQTPYFGE NLDGLLRERG YALKGIVNGI DYYEFNPSKD SLIAKNFSVE TIEDKVLNKL ALQKELGLPI NQDIPMISIV SRLTNQKGCD LIVNIAHRLL QRNVQLVILG TGDYNYENHF KGLQELYPTK VSANIKFDNG LAHRIYASSD IFLMPSLFEP CGLGQLIALR YGAIPIVRET GGLKDTIHSY NKYTGIGNGF SFTNYNNNDL MHVIELALET YDDKEVWRSL IIQAMDSDNS WNTSAEKYKE LYEELIK
|
| |