Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0028 |
Symbol | |
ID | 4205960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 35912 |
End bp | 37072 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 642564571 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_697373 |
Protein GI | 110803943 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA AAAAACTTTT AATTTCAATT TCTTTATCAA TATTTTTATT ATTAATTATA GTTGTTTCAT ACTTTATTTT CTCATACTCA AATAATTTAA ACAAATTTAA AGAGGATTTA TCATCAAATA ATTATGAGGA TGCCGCCTAT TGTTTTAATA ATGGAACAAA AAGTATTATA TTGAAAAAAA CTTTTATTAA ATCATCAGAA GATATAATTA CAGAAAAATT ATCAGAAATA GAAAATGAGT ATTATTCTGG AGATATATCT GAAGAAGAAA CTGTAAAAGA TTTAAATGGA CTATTATCAT TAAATACGTC TAATGAGGAA ATTTTTAATT TTAAAAACAC AATTCCTCTA ATAAAAGATT CAAAGGACTC ATTTGATATT GGAATTTCTA AGCTAGATGA AGAAAATTAT TTAGAAGCTT TAAACTACTT TAAAAGTGTA CATAATCTTT CAGATTGTAA AGCTCAAGCA CTAGAATGTG AAGAAACTTG CTTAGATAAA ATAAGAGAAC CTATTTTAGA AACTGTAGAT GAATATATAT CTAATGAAAA ATATTCAAAA GGAATAGAGT ATTTAGATTC TAAAATCAAT TCTCTACCTG ATGATCCAAA ATTACAGGAA AAAAGAGATG AATTAGAAAA TCTTAGATTG GAGCATCTTG AAGCTTATAG TCAAGAAAAT ATAGACAAAG CCACAGCTAG AACTGCTCCT GTTATGGAAT ATTATAAAAA ATTAAATGAA GATACAATAA ATCAATTTGA TATAACTAGT AACACTAATT ATTTGGTTTT CGTGAATATA GCTGAACAAA AAACTTATGT ATATGAAGGC TCAAAAAATG ATTGGACTTT AGATAAGACA TTTACTTGTT CAACAGGTAT TGAAGGAAAG GAAACTCCTG TAGGAATATT TACTGTACAA ACTAGAGCTC CTTGGTTTTT CTCACCTAAA TACGGACAAG GTGGAAAATA CTATGTTCAA TTTATGGGTA ACTATTTATT TCACTCAATC CCATTTAATT CTGATAAAAC TACAGTATCA GATCCAACTT TAGGGGTGCC AGCTTCCCAC GGATGCATAA GATTATCAGT TGAAGATTCT AAATGGCTAT ATGATAATGT ACAAAATGGT TCAAAAATAA TAATTTACTA A
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Protein sequence | MKNKKLLISI SLSIFLLLII VVSYFIFSYS NNLNKFKEDL SSNNYEDAAY CFNNGTKSII LKKTFIKSSE DIITEKLSEI ENEYYSGDIS EEETVKDLNG LLSLNTSNEE IFNFKNTIPL IKDSKDSFDI GISKLDEENY LEALNYFKSV HNLSDCKAQA LECEETCLDK IREPILETVD EYISNEKYSK GIEYLDSKIN SLPDDPKLQE KRDELENLRL EHLEAYSQEN IDKATARTAP VMEYYKKLNE DTINQFDITS NTNYLVFVNI AEQKTYVYEG SKNDWTLDKT FTCSTGIEGK ETPVGIFTVQ TRAPWFFSPK YGQGGKYYVQ FMGNYLFHSI PFNSDKTTVS DPTLGVPASH GCIRLSVEDS KWLYDNVQNG SKIIIY
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