Gene CPF_2982 details

Gene Information

• Locus tag: CPF_2982
• ID: 4202417
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 3243259
• End bp: 3243906
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638083849
• Product: LysE family translocator protein
• Protein accession: YP_697336
• Protein GI: 110800112
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTTTTT TCTATTTAAA GGCTATTTTA TCTGGAATTG TAACAGGCCT ATTAGTTTCT 
ATACCATTAG GTCCAGCTGC AATAGAAGCT GCAACACAAT CTCTAGATAA AGGATTTAAA 
AAAGGCTTTG AAGTTTCATT AGGCGCAATA GCTGCTGACT ATTTGTACAT ATTATTAATA 
AACTTCGGAG TAGCCCAATT ATTAAATTTA AATAGGTATG TAGAATGTGC CTTTTGGATT 
ATTTCAGGAT TAGTTCTTAT AATAGTTAAT TTAATATTTA AATCTTCTCA AAAAAGTTTA 
GACGAAAAAT GTGTTGAAAC TATAGATAGT CATAAAACTG GTAATGGTTT TATAAATGGT 
TTTTTAATAA CCTTTGTAAA CCCTATGACT TTATCAGTAT GGATGGCTGT AAGTGCTGGA 
ATAATGAGTA TATGGAAACT TTCAGGTAGA CATTTCTTTT TAGTAGCCAT AAGTGCTATG 
TTTATAACAA CTTTAGCTTG GTTTATATTA TTAAATTTTA TGGCTGCCAA AGGTGGAAGT 
CTAGTAAAAA AAGAACTTAC TGGTAAGGCT GATAAAAGTG TAAAATATTT TATGATTTTA 
CTTGGATTAG GATTTACTAT ATACGGAATA TTTAAAATTT TCATGTGA 

 

Protein sequence

MSFFYLKAIL SGIVTGLLVS IPLGPAAIEA ATQSLDKGFK KGFEVSLGAI AADYLYILLI 
NFGVAQLLNL NRYVECAFWI ISGLVLIIVN LIFKSSQKSL DEKCVETIDS HKTGNGFING 
FLITFVNPMT LSVWMAVSAG IMSIWKLSGR HFFLVAISAM FITTLAWFIL LNFMAAKGGS 
LVKKELTGKA DKSVKYFMIL LGLGFTIYGI FKIFM