Gene CPF_2893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2893 
SymbolmurI 
ID4203366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp3162318 
End bp3163100 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content31% 
IMG OID638083760 
Productglutamate racemase 
Protein accessionYP_697257 
Protein GI110800511 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0796] Glutamate racemase 
TIGRFAM ID[TIGR00067] glutamate racemase 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGATG ATTTAAAGAA TGCACCTATA GGTTTTTTTG ATTCTGGCTT AGGAGGCTTA 
AGCGTTTTAA GAAAAGCCTT AGAAATGATG CCAAATGAAA ATTATATATA TTATGGGGAT
TCTAAGCATG CACCTTATGG AGAGAAGACT CCACAAGAGA TAAGGTCACT TTCATTTAAT
GCTATTGAAT TTTTAATAAA AAAGGGAGCT AAGGCAATTG TAATAGCATG TAATACTGCA
ACTTCAGCAG CAGCTCATGA TCTTAGAGAG TATTATAAAG ATATACCTAT AATAGGCATA
GAACCTGCTT TAAAGCCTGC TATAAAGTTA CATGAAACTG GATCAGTAAT AGTAATGGCA
ACAAAGGCAA CTTTAAATCA AGAGAAATTC AAAAATCTTA TGGATAAATA TGGGGAGCAT
AGAGAAGTAA TACCTCTTCC TTGTCCAGGG TTAGTTGAAT TTATAGAGGC AGGAGATTTA
GAGGGAGAAG ATGTAAAAAA CTTCTTGAGA GAAAAATTAA ATCCTTATAT GGATAGAGAA
ATTTCAAGTA TAGTTTTAGG ATGCACTCAT TATCCTTTTG TAAAAGATGT AATACAAGAT
ATTGTTGGAG AAAAAGTAGA CATAATAGAT GGAAGTTCAG GCACGGTAAG AGAGTTAAAA
AGACGATTAG AAGAAAATAA TATGGAATCA GAATCAAAGA AAAAAGGTAA TTTAGATATA
TTTAATTCCT TAGAAGATAA GAAAATATTA GAGTTAAGTA AAAAGCTTAT AGAAATTAAA
TAA
 
Protein sequence
MQDDLKNAPI GFFDSGLGGL SVLRKALEMM PNENYIYYGD SKHAPYGEKT PQEIRSLSFN 
AIEFLIKKGA KAIVIACNTA TSAAAHDLRE YYKDIPIIGI EPALKPAIKL HETGSVIVMA
TKATLNQEKF KNLMDKYGEH REVIPLPCPG LVEFIEAGDL EGEDVKNFLR EKLNPYMDRE
ISSIVLGCTH YPFVKDVIQD IVGEKVDIID GSSGTVRELK RRLEENNMES ESKKKGNLDI
FNSLEDKKIL ELSKKLIEIK