Gene CPF_2679 details

Gene Information

• Locus tag: CPF_2679
• Symbol: rplM
• ID: 4201152
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2955059
• End bp: 2955493
• Gene Length: 435 bp
• Protein Length: 144 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 638083545
• Product: 50S ribosomal protein L13
• Protein accession: YP_697059
• Protein GI: 110798874
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000200743
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATCAT ACATTGCAAA AGCACAAGAA GTTGAAAGAA AATGGTATGT TGTTGACGCT 
GCTGGAAAGC CACTAGGAAG AGTTGCTAGC CAAGTTGCTT CAATATTAAG AGGAAAGAAC 
AAGCCAACAT TTACACCAAA TGTTGACTGT GGAGATTTCG TTATCGTTAT AAACGCTGAG 
AAAGTTGTTT TAACTGGTAA GAAATTAGAC CAAAAAATGT TAAGAAAACA CAGCTTATAC 
GCTGGTGGAT TAAAAGAAAC TCCATACAGA GAAGTTTTAG AAAAGAAACC TGAATTTGCT 
TTCGAAGAAG CAGTTAGAAG AATGCTTCCA ACAGGCGTTT TAGGAAGAAA AATGTTAAAG 
AAATTAAACG TGTACAGAGG AGCTGAGCAC GATCACGCTG CTCAAAAACC AGAAGTACTT 
GAGTTAAGAT ACTAA 

 

Protein sequence

MKSYIAKAQE VERKWYVVDA AGKPLGRVAS QVASILRGKN KPTFTPNVDC GDFVIVINAE 
KVVLTGKKLD QKMLRKHSLY AGGLKETPYR EVLEKKPEFA FEEAVRRMLP TGVLGRKMLK 
KLNVYRGAEH DHAAQKPEVL ELRY