| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2570 |
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| Symbol | |
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| ID | 4203497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2834874 |
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| End bp | 2836562 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638083437 |
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| Product | secretion system protein E |
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| Protein accession | YP_696960 |
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| Protein GI | 110799562 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATTAGTT ATCAGAAAAA GCGTTTAGGA GATATACTAA TTGAATCAGG AAAGCTTACA
GAGGATAAGC TTAAAGAAGC ATTGATTATT CAGAAGCAGG TTGGAAAGAG GCTTGGAGAA
ATTTTAGTTG AACAAAACTT TGTTACTGAA GAGGATATAA TAGAAGTTTT AGAAAAACAA
TTAAATATTG AAAGAGTAAA TCTTGAAATT ATAAGAATAG ATAGAAGAGC TATAAAGATG
ATTTCAGAAA ATGTTTGTAG AAAGCATTTA ATAGTTCCAT ATGAAATAGA TGATAATACC
ATAAAAGTTG CAATGGCAGA TCCCTTAGAT ATAGTTGCAA TAGATGATGT TGAGATTTCT
ACAGGTTTAA ATGTGCGTCC TTATATAGCA GTAAAACAAT CTATTCAAAG AGCTATAGAT
ATATATTATT CAAACCAAAA GGTTTTATCA GCAGCGGAAG AATTAACTAA GGAAGTTGAT
GAAGGAAATA ATCTTATTTT AGATAATATT GAAGAAGTTG ATAACTTAGA TAATGCTCCA
ATTATAAAAA TGATTGAATA TGTAATGAAA AATGCAGTAG AGGAAAGAGC TAGTGATATA
CATATTGAAA GCTATGAAAA TATATTAAGA ATTAGATATA GAATAGATGG TAAATTACAT
ACAATATCTA CTTTGCCAGT AGATACCCTA GCTCCCTTAG TTACTCGTAT TAAAATTTTA
GCAAACTTAG ACATATCAGA GAAAAGACTT CCTCAAGATG GAAGAATTCT TACTAGATTT
GGAGATAAAC AAATTGATTT AAGAGTATCT ATTCTTCCAA TGATAACAGG AGAAAAGATA
GTTATAAGAA TAATAAATAA AGAAAATTTC ATAATTTCTA AGGAAGGGCT TGGAATAAAG
GACTATGAAC TTAATTTATT AGAAAAAATA ACAAAGCATT CTAATGGAAT AATTCTTGTT
ACAGGTCCTA CAGGAAGTGG TAAAACAACA ACGCTCTATA CTATTTTAAA TGAGCTAAAT
ACAGATAGTA AAAATATTAT TACTATAGAA GATCCTGTTG AAGTATCAAT TGAAGGAATT
AACCAAGTTA ATGTTAATAA TAAAGTGGGG TTAACTTTTG CAACGGGATT AAGATCTATA
TTAAGACAGG ATCCAGATAT AATAATGATT GGAGAAATAA GAGATTCTGA AACGGCTCAA
ATAGCAATAA GATCAGCTAT TACAGGTCAT TTAGTTTTAT CAACTTTACA TACTAATAAT
GCTCCATCTA GTATTTTAAG ACTTGAGGAT ATGGGGGTTC AAAGATATTT AATTGCCAAT
GCTATTAAAG GAGTTATAGC TCAAAGACTT GTTAGAAAAA TTTGTCCAAA GTGTAAATTA
CAATATGATG CTACACCATA TGAAAAAGAA ATATTAAATA TAGATAAAAA TGAAGAACTT
ATACTTCATA AAGGTAAAGG TTGTGCTTAT TGTAATAATA CTGGTTATGT AGGTAGAATG
GGTATTTATG AAATTATGGA AGTGACTAAA GAACATAGAG AGGCTATTTT AGAAAATAAA
AGTGCGGATA TTCTTAAGGA GATTTCAATT AAAAATGGCA TGAGAACTCT TGGACAAGCA
TGTAGAAGTT TAGTCTTAGA GGGAAATACC ACAGTTGAAG AAATGTTAAA TATAACTTAT
GATATGTAA
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| Protein sequence | MISYQKKRLG DILIESGKLT EDKLKEALII QKQVGKRLGE ILVEQNFVTE EDIIEVLEKQ
LNIERVNLEI IRIDRRAIKM ISENVCRKHL IVPYEIDDNT IKVAMADPLD IVAIDDVEIS
TGLNVRPYIA VKQSIQRAID IYYSNQKVLS AAEELTKEVD EGNNLILDNI EEVDNLDNAP
IIKMIEYVMK NAVEERASDI HIESYENILR IRYRIDGKLH TISTLPVDTL APLVTRIKIL
ANLDISEKRL PQDGRILTRF GDKQIDLRVS ILPMITGEKI VIRIINKENF IISKEGLGIK
DYELNLLEKI TKHSNGIILV TGPTGSGKTT TLYTILNELN TDSKNIITIE DPVEVSIEGI
NQVNVNNKVG LTFATGLRSI LRQDPDIIMI GEIRDSETAQ IAIRSAITGH LVLSTLHTNN
APSSILRLED MGVQRYLIAN AIKGVIAQRL VRKICPKCKL QYDATPYEKE ILNIDKNEEL
ILHKGKGCAY CNNTGYVGRM GIYEIMEVTK EHREAILENK SADILKEISI KNGMRTLGQA
CRSLVLEGNT TVEEMLNITY DM
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