Gene CPF_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2548 
Symbol 
ID4202074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2808494 
End bp2808943 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content29% 
IMG OID638083415 
Producthypothetical protein 
Protein accessionYP_696938 
Protein GI110799250 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATAA TTATTGATGG TGATGGATGT GCAGGAAGAG ATATAATTGA AGAGGTTGGT 
AAAAAGCATT CAGTTAAAAT ATTAATTTAT TGCACAATAA ATCATATGAT AAATTCAGAT
TACTCTGAGG TGAGAATGGT TGATGGTGGA TTTCAAAGCG TAGATATGTA TGTGGCTAAT
AATACTGAGG AAAATGATAT TGTAATAACT CAAGATTATG GAGTTGCAGC TATGGCTTTA
GGAAAAGGAG CTTTAGCCAT TAGCCCTAGA GGATATATTT ATGACAATGA TAATATTGAT
AGATTACTTT TTGAAAGACA TTTAAGTCAA AAAAATAGAA GAGCTGGTGG GAAATCAAAA
GGAAATCATA AAAGAAATAA AGAAGATGAT GATAGACTTT ATTATAATTT AGAAGTTTTG
ATAGAAAAGG TAAAGGCTAT TTTAAATTAG
 
Protein sequence
MKIIIDGDGC AGRDIIEEVG KKHSVKILIY CTINHMINSD YSEVRMVDGG FQSVDMYVAN 
NTEENDIVIT QDYGVAAMAL GKGALAISPR GYIYDNDNID RLLFERHLSQ KNRRAGGKSK
GNHKRNKEDD DRLYYNLEVL IEKVKAILN