Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2482 |
Symbol | cotS |
ID | 4201762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2754056 |
End bp | 2755060 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638083347 |
Product | spore coat protein CotS |
Protein accession | YP_696896 |
Protein GI | 110800776 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | [TIGR02906] spore coat protein, CotS family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.915972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGAG AGTTTGAAAT AGAAAGACAA TTTGATATTA AAATAGAAAA ATTAAAACCT AATAAGGGTG TATATTATTT AAAGAGTAAT AAGGGTGACA GGTGTTTAAA AAGGATAAAC TATGGAACTC AAAAACTTCT TTTCGTTTAT GGAGCAAAGG AGCATTTGGC TAAAAATGGA TTTGAACATA TAGATAGATA TTTCTTAAAT ATTGAAGATG AACCTTATGC TCTAGTAAAT GAGGATTTAT ATACTCTTTC AAATTGGATA AAGGGAAGAG AGTGTGATTT TACTAACATA GAAGAGGTTA AATTAGCTGC TAAAAAGTTA GCTGAATTAC ATGAAGCCAG CAAGGGATAT GATCCACCAG AAAACTCAAA ATTAAAAAGT GATTTAGGAA GATGGCCATA TCTTATGGAG AAGAGAGGCA AAGCCTTAGA AAAAATGAGA GGAATGGCTA GAAAGAAGAA TTTAAAAAAA GATTTTGACA TTATTTATAT AAAAAATGTT GATTTTTATA AGGAGTTAGC AATAAGAGCC ACAAAAATAT TAAATAATTC AAAGTATTTA AGTTTATGTG AGGAAGCAGA GGCTGAGAAA GTATTTTGTC ATCATGATTA TACTTATCAC AATATAATAA TTGGAGATGA TAATGAAGTA TATATAATAG ACTTTGATTA TTGTAAAAGA GAAATAAGAA CATATGACAT AGCTAACTTC ATGAAGAAGG TTTTAAAAAG AGTTGACTGG AATATTGAAT ATGCAGAGGC CATAATAGAT GCTTATAATA CAGTAAGTCC ATTAAGAGAA GAAGAATATG AGGTATTATA TGCATACTTG TTATTCCCAC AAAGATATTG GAGACTTGCA AATAGATACT ATTACAATGA AGTTATGTGG GGACAAAATA TCTTTATAAA TAAAATAAAC AACATAATTA ATGAGAAAGA AAGTTATATG AAATTTATTG AAGAATTTAA AAGTAAATAT AATCAAGTTG GATAA
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Protein sequence | MMREFEIERQ FDIKIEKLKP NKGVYYLKSN KGDRCLKRIN YGTQKLLFVY GAKEHLAKNG FEHIDRYFLN IEDEPYALVN EDLYTLSNWI KGRECDFTNI EEVKLAAKKL AELHEASKGY DPPENSKLKS DLGRWPYLME KRGKALEKMR GMARKKNLKK DFDIIYIKNV DFYKELAIRA TKILNNSKYL SLCEEAEAEK VFCHHDYTYH NIIIGDDNEV YIIDFDYCKR EIRTYDIANF MKKVLKRVDW NIEYAEAIID AYNTVSPLRE EEYEVLYAYL LFPQRYWRLA NRYYYNEVMW GQNIFINKIN NIINEKESYM KFIEEFKSKY NQVG
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