Gene CPF_2456 details

Gene Information

• Locus tag: CPF_2456
• Symbol: atpF
• ID: 4201148
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2726674
• End bp: 2727153
• Gene Length: 480 bp
• Protein Length: 159 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638083321
• Product: F0F1 ATP synthase subunit B
• Protein accession: YP_696870
• Protein GI: 110798870
• COG category: [C] Energy production and conversion
• COG ID: [COG0711] F0F1-type ATP synthase, subunit b
• TIGRFAM ID: [TIGR01144] ATP synthase, F0 subunit b

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAAATAG ATTTTATGAG AATATTAGCT ACAATCATTA ACTTTATAAT ATTAATTCTT 
ATACTAAAAC ATTTTTTCTG GGACAAAATC AAAAGAGCCA TCGATGCAAG ACAAGAGGCT 
ATAGATGAAA CTATCTTAAA GGCCGATGAA GATGCAGAAA AAGCAAGAAG ATTAAGATTA 
GATAATGAAA GAATTCTTAA ATCTGCTAAA GAAGAAGGCA GAAAGCTTAG AGAAGAACAG 
AAAAAAGAAG CTGATAGAAT TTATAAAGAA ATAGTTGATG ATGCTCATAG AGAAGCTGAG 
GCTATAATAA ATAGAGCTAA TATTGAAATT CAAAGAGAAG AAGAAAAAGT AAAATACGAG 
TTAAAGCAAC AAGTAGTTGA TATTTCTGTA ATGCTTTCAG AGAAAGCACT TGGAGAATCT 
ATTGATGAAT CTAAACATAG AGAATTAATA AATGATTTTA TTGAAAAGGT AGGTATCTAA 

 

Protein sequence

MEIDFMRILA TIINFIILIL ILKHFFWDKI KRAIDARQEA IDETILKADE DAEKARRLRL 
DNERILKSAK EEGRKLREEQ KKEADRIYKE IVDDAHREAE AIINRANIEI QREEEKVKYE 
LKQQVVDISV MLSEKALGES IDESKHRELI NDFIEKVGI