Gene CPF_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2447 
Symbol 
ID4201284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2717741 
End bp2718511 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content31% 
IMG OID638083312 
Productputative peptidase 
Protein accessionYP_696861 
Protein GI110800862 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AAGACCAATT TAAGAGATTT ATTAAAAAGG ATGGATTTTA TGTAGTTTTA 
TTTGTTTGCC TATGTTTAGT AGCAACAGTT GGAGTAGTGG TAGCAAATAA AAGCACAAAT
AACACAGTAG AAGAAAATAT AGCAGAAAAC ACTATAGAAA ATACAGAGGA TAATAGCACT
ACAACTGGTA ATACTTTTGA TGATGCTGAA CTAGTTGAAG GAAAAACAGA TATAGCAAAT
GATTCAGAAG AGATTGCATC TAATGAAGCT AATGGTGAAG AAGTAAAACC TGAAGCAAAT
AATGCTGATA AGTCAGTTGC AACTTCAAGC CAAAGTCAAA GCTTTACATC ACCAATTAAG
GGTGGAGTTA TAACAAGATT ATATAACTTA GAACCTAGAT TAAATGAATC AGGTCAAAGT
GCATCTGTTT ATAAAGGAAT AGATATAGAA GCTGCTGAGG GAACTGAAGT TTTAGCAATT
GGTGATGGTA AAGTTGTAGA GGCTGGAAAA GGAAACTCAA AAGAAGGTTG CTTTGTTAAA
ATAGAGCATC AAAACGGTAT TGTTGGTTTT TATGGAAACT TAGATCCAGA GATTAAAGTT
AAAGAAGGGG ATAATGTTAA AAAAGGAGAT TCTATAGGTA AGATTGGAAA AACTATTCAA
AATAGTCCAA GTGATAGAGT TTCTGAAAAT TATTTAATGT TCCATATGGA AAATTCTAAG
GAGCCAGTAG ATCCACAAAA ATACTTAAAA GATATTCCTG TAAAAGAATA A
 
Protein sequence
MNKKDQFKRF IKKDGFYVVL FVCLCLVATV GVVVANKSTN NTVEENIAEN TIENTEDNST 
TTGNTFDDAE LVEGKTDIAN DSEEIASNEA NGEEVKPEAN NADKSVATSS QSQSFTSPIK
GGVITRLYNL EPRLNESGQS ASVYKGIDIE AAEGTEVLAI GDGKVVEAGK GNSKEGCFVK
IEHQNGIVGF YGNLDPEIKV KEGDNVKKGD SIGKIGKTIQ NSPSDRVSEN YLMFHMENSK
EPVDPQKYLK DIPVKE