Gene CPF_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2421 
Symbol 
ID4203814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2694788 
End bp2695408 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content27% 
IMG OID638083286 
ProductCBS domain-containing protein 
Protein accessionYP_696842 
Protein GI110800434 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAGTAA AAGCTATTAT GACAAAGAAA GAAAATCTAG ATTTAGTTGA TTCTAATACT 
AAACTTAAAG ATGCACTAAA AATCATGGAG GATAATAAGT TTTTATCAAT TCCTGTAGTA 
GATGGAGATA AATTTAGAGG GGCAGTAGCT AAAAGCTCTA TCTATAAATA TTACTTTAAA 
CATAATTTAA GCAAAGATGA AGTATTAAAT AATATTACTG TAGGTGAAAT ATTAAAAACA 
GAAGTTCCTA TAATAAATAA ATCAGAACAT ATAGAAAAGG CAGTATCCAT GCTAGAAAGA 
ATGAGAATTT CTTTTGTGGC TGTAGTAGAT GAATTTGATA ATTTCAAAGG AATACTAACT 
CATAAGGCAG TTTTTAGAGA ATTTAACAAT GCTTTTGGAC TTAATAAAGG GGAAAGAATA 
GTAATAAGAT CTTATGATGT CCCAGGACAA TTATCAAAAA TAACTAAGAC AATATCTGAA 
GAAGGTGGAG ATATATTAAG CATAGTTATT GTAGATACAA AGAGTCTAAC TGATGTTAAA 
GAGGTTATAG TTAGGGTTAA AAGTATAGAT GTTGAAAATA TTAAAAAGAA ATTAAAAGAG 
TCAGGATTCA AATTAGCATA G
 
Protein sequence
MLVKAIMTKK ENLDLVDSNT KLKDALKIME DNKFLSIPVV DGDKFRGAVA KSSIYKYYFK 
HNLSKDEVLN NITVGEILKT EVPIINKSEH IEKAVSMLER MRISFVAVVD EFDNFKGILT 
HKAVFREFNN AFGLNKGERI VIRSYDVPGQ LSKITKTISE EGGDILSIVI VDTKSLTDVK 
EVIVRVKSID VENIKKKLKE SGFKLA