| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2238 |
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| Symbol | |
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| ID | 4203879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2483377 |
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| End bp | 2485539 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638083103 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_696662 |
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| Protein GI | 110800113 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.735062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAAGG TAATAATTGC AGAAAAACCA TCTGTTGCTA GAAATATTGC AGATGCTTTT
AATATAAAAA AGAGAAAAGA TGGATACTTT GAAGGCGAAG AATATCTTAT AACATGGGCT
TTCGGACACT TATTGCAGTT ATTTGATGCA AAGGATTATG ATGAGAACAT GAAGGGATGG
AGAATGGAAA AATTTCCTTT TATCCCAGAA GTTTTTAGAT ATAAAATAAA ACAAGATTCT
TTAAATAGAA ACATCATTGA TAAGGGTGCG GAAAAGCAAA TAAAGATAAT AAAAGGTCTT
ATAGATAGAG AAGATGTAGA TGGAATAATT TCTGCTACTG ACTTTGATAG AGAAGGACAA
GTAATTGCAG ATGAAATTTT CCTATATTTT AGTGAAAAGA AACCAGTATA TAGACTTTTA
TTAAATGAAT GGACACCAGA TGAAGTTAAA AAAGGAATGG AAAAGTTAAA ACCTAATGAG
GAAATGCAAT CTCTTCAAGA TGCTGGTATA GGAAGACAGT GGGCAGACTG GATAATAGGT
ATAAACTTAA CTTCTGTGAC AACAATAAAA TATAAGCTAA ATGATGGACA GATTTTAAAT
ATAGGGAGAG TTCTTCTACC TACTTTAAAA ATAATTTATG ACAGAGATAA AGAAATAGAG
AACTTTAAAT CAAGTGCATA TTACAAACTT AATGGTACTT TTAAGACTTC AAAAAATGAG
GAGTTTGAAG GAACTTATTA TGAAAATAAT TCAGAGAAGT TTGAAGATAA AAAGGTTTTA
GATGAGATTA AAGAAAAGAT AAAGGATAAA AATGCTGAAA TAATTGAAAA GCAAACAGAA
AGAAAAAAAG AATATCCACC ATTTTTATTT AATCTTTCTA ATCTTCAAGG ATACATAACA
AGTAAATACA AAGGATGGAC TTCAGATAAG GTTTTAAAAG TAGCTCAATC TTTATATGAA
AAGAAGTTTA TAACTTATCC TAGAACAGGA AGTATGGCTC TAGAGGAGAG CTTAGTTGAT
AGAACTAGAA ATGTTTTAGA AAAGCTTAAG GTAGGCTTGC CTTATGAGGA GCAAATAAAG
TTTGTTCAAA ATAAAAGGGT TTTTGATAAT TCAAAGGTTG AGAGCCATAG TGCCATAGTT
CCAACTTACA TGAAACCTAA TAATTTAACA CAAGATGAAA GAATAGTTTA CACAGCAGTT
AAAAATAGAT TTCTTATGCA ATTTATGCCC GTAGCTGAAT TTGAGGAAAC AAAAATAACT
TCTAAGGTAA ATGATAAAGA GGTTAAGGGC GTATTTATTT CAAAAGGAAA AGTTCAGCTT
GTAGAAGGAT GGAGAGTTGT TGAAAAAATA GATAGTAAAG ATACAATTCT TCCAATGGTA
AATGAAAAAG AAGTAGTAGA CTTAGTAGAT AGTAAAATAA ATAAGGTTAC TAAAAAACCA
CCTAAAAAGC ATACTGAGAA GACTTTACTT AGGGTAATGG AGACTTGTGG TAAGAGTTTT
AAAGAGGATG CAGAGGAAGA TAGTGAAGAA ATGATGGCCT CAATATTAAG TGGATTTAGT
ATAGGAACAC CTGCTACTAG AGCTGAAACA ATTAAAAAGC TTAAGGATGT AGGATATATT
ACCACAAAGG GAAAAAGTTT AACTTGTACA GAGCTTGGTA GAACCATAGT TGAAATATTC
CCTGTTAAGG AACTTTTAGA TTTAGAATAC ACAGGAAGAC TAGAAAAAAC TCTTTCTGAT
ATAGAAAGAG GGAAGGTAAA AAAAGAAGAT TTCTTAAATC TTATAAAAAA CTTTACTATA
GAGGGAGTTA AGGCTATAAA AAATGATGAT TCCATGGCAA AACACTTTAA AGTAGAGGCT
CCAGAAGGGG TAGAGGTTTT AGGAAAATGT CCTAACTGTG GAAATCCTGT TATAGAGGGA
GAAAGAGGAT TTGGATGTGT TAACTGGAAA AATGGATGTA AATATACCAT ATGGAAAAAT
GATAAGTATA TAGCTTCCTT TGGAAAACAA GTAACACCTC AGATGGTAAA ACTTCTATTA
GCTAATGGAA AAGTTGGATT TAGAAATTTA AAAAGTAAAA AGGGAAATAC CTTTGCAGCA
TACTTCATAT ATGAAAAAGA TGAAGAAAAA GGTTATTTCA CATGGAGAAT GGAATTTATT
TAA
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| Protein sequence | MKKVIIAEKP SVARNIADAF NIKKRKDGYF EGEEYLITWA FGHLLQLFDA KDYDENMKGW
RMEKFPFIPE VFRYKIKQDS LNRNIIDKGA EKQIKIIKGL IDREDVDGII SATDFDREGQ
VIADEIFLYF SEKKPVYRLL LNEWTPDEVK KGMEKLKPNE EMQSLQDAGI GRQWADWIIG
INLTSVTTIK YKLNDGQILN IGRVLLPTLK IIYDRDKEIE NFKSSAYYKL NGTFKTSKNE
EFEGTYYENN SEKFEDKKVL DEIKEKIKDK NAEIIEKQTE RKKEYPPFLF NLSNLQGYIT
SKYKGWTSDK VLKVAQSLYE KKFITYPRTG SMALEESLVD RTRNVLEKLK VGLPYEEQIK
FVQNKRVFDN SKVESHSAIV PTYMKPNNLT QDERIVYTAV KNRFLMQFMP VAEFEETKIT
SKVNDKEVKG VFISKGKVQL VEGWRVVEKI DSKDTILPMV NEKEVVDLVD SKINKVTKKP
PKKHTEKTLL RVMETCGKSF KEDAEEDSEE MMASILSGFS IGTPATRAET IKKLKDVGYI
TTKGKSLTCT ELGRTIVEIF PVKELLDLEY TGRLEKTLSD IERGKVKKED FLNLIKNFTI
EGVKAIKNDD SMAKHFKVEA PEGVEVLGKC PNCGNPVIEG ERGFGCVNWK NGCKYTIWKN
DKYIASFGKQ VTPQMVKLLL ANGKVGFRNL KSKKGNTFAA YFIYEKDEEK GYFTWRMEFI
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