Gene CPF_2222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2222 
Symbol 
ID4203293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2470211 
End bp2470750 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content33% 
IMG OID638083087 
ProductDNA-binding protein 
Protein accessionYP_696646 
Protein GI110801118 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAATAG GAGATAAAAT TAGACGTCTC AGAGTGGCCA AACAGTTGAC TCAAGAAGAA 
TTAGCAAATA GATGTGAATT ATCTAAGGGA TTTATTTCTC AGCTTGAGAA TGACCTTACT
TCTCCATCTA TAGCTACATT AATAGATATA TTAGATATAT TAGGAACTAA TTTAACGGAA
TTCTTTAGTG AAGATACTAA TGAAAAGATA GCCTTCTCTA AGGATGATAT GTTTGAAACT
GAAAATGAAG AATTAAAATA TAACCTTATG TGGTTAGTTC CAAATGCTCA AAAGAATGAT
ATGGAACCTA TAATGATAAC GCTTGAACCT GGAGGACAAT ATATTGAAGA AGAGCCTCAT
GAGGGTGAGG AATTTGGGTA TGTCCTATCT GGAGCAATAT ATCTTCATCT AGGAGACAAA
AAAGTAAAAG TAAGAAAAGG CGAGAGTTTC TACTTTAAGC CCAAGGCTAA TCATTATATT
TCTAATGCAG GAAAAATTTC TGCAAAGGTT ATATGGATAA GTACTCCACC ATCATTTTAG
 
Protein sequence
MEIGDKIRRL RVAKQLTQEE LANRCELSKG FISQLENDLT SPSIATLIDI LDILGTNLTE 
FFSEDTNEKI AFSKDDMFET ENEELKYNLM WLVPNAQKND MEPIMITLEP GGQYIEEEPH
EGEEFGYVLS GAIYLHLGDK KVKVRKGESF YFKPKANHYI SNAGKISAKV IWISTPPSF