Gene CPF_2176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2176 
Symbol 
ID4203212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2415821 
End bp2416171 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content26% 
IMG OID638083041 
ProductTPR repeat-containing protein 
Protein accessionYP_696600 
Protein GI110799917 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAACT TTTCTAAAGG TAATGAATTA TACAATACTA GAAATTATTC TGATGCTATA 
AATTACTATA AAAAGGCTTT AGATAACGAT GAGTGTAAAT GCCACAGTTA CTATAATGCT
GGCGTTTGCT ACATAAAACT AAAGCAATAT GAAAAAGCTA TTGAAATGAT AACTAAAGCT
TTAGAGCTAT ACCAAGACTC AAAATATTTT TTCAACTTAG CCTATTGTTA TTCAATGATA
AATAATAATT CTAAGGCTTT GAGATATTTT AACTTAGCTT GGGCATTAGA TAATGCAGAT
ATTGATTGTG AAAAAGCTAT AAGTTTAATT TTATCAAAAA TCTCAAAATA A
 
Protein sequence
MSNFSKGNEL YNTRNYSDAI NYYKKALDND ECKCHSYYNA GVCYIKLKQY EKAIEMITKA 
LELYQDSKYF FNLAYCYSMI NNNSKALRYF NLAWALDNAD IDCEKAISLI LSKISK