Gene CPF_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2111 
Symbol 
ID4202491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2340783 
End bp2341499 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content29% 
IMG OID638082976 
Producthypothetical protein 
Protein accessionYP_696540 
Protein GI110798832 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAAGT TGTCTTCACA AATTATTATA GGTATAGTTT GTGCTTTGTT AGGGTTTTTA 
TTAACCTACC AATTTAAAAT TATAAATAAT AAAGAGAAAA ATATAATAGA AAATTATAAC
CAAAATGACA TAATGGCAGA GATAGACGGT CTTAAGAAGG AGAAAGAAGA GCTTCAAAAG
AATAATGATT CTTTAAATAA GAGGCTTAAA GAAATGGAGG ATGCAGCAGC ATCTAAAGGG
GATGTAAATA ATAAAATAAA AGAGCAATTA GATAAAACAA GAATGATTTT AGGAACTGAA
GAGGTTAAGG GGCCAGGAAT AATTTTATCC ATAACACCTA AATCTCCATT GCTTACTTCA
AAGGATCCTG AATATATAAG TGAAAAGGAG ATAATTCATA TATTAAACTT ATTAGCTTTC
TCAGGTGCAG AAGCTATTGC AGTTAATGAT ATTAGAATAA CTCCTCAGAC AGGAATAAAG
AATGCTAGCA ACTTTATATG GATAGGAAAT AATGAAAGAA TTTCTCCAAA GGAGAAGCTA
ACAATAAAGG TTATTGGTAA TCAAGATAAC TTAATAAAAG GAATTGATTT CCCAGGGGAA
ATGGACTATG GAGTATTAGG AGGTAATTAT GATTATAAAT ATGAGAAGAA AGATTCAATT
ACAATACCTA AGACTACTCA AAACCTATCT TCTGAATATT TAAAAAAGGT TGATTAG
 
Protein sequence
MKKLSSQIII GIVCALLGFL LTYQFKIINN KEKNIIENYN QNDIMAEIDG LKKEKEELQK 
NNDSLNKRLK EMEDAAASKG DVNNKIKEQL DKTRMILGTE EVKGPGIILS ITPKSPLLTS
KDPEYISEKE IIHILNLLAF SGAEAIAVND IRITPQTGIK NASNFIWIGN NERISPKEKL
TIKVIGNQDN LIKGIDFPGE MDYGVLGGNY DYKYEKKDSI TIPKTTQNLS SEYLKKVD